RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 ANKRD20A3Q5VUR7 823 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 RRAGBQ5VZM2 374 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ARHGAP17Q68EM7 881 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ANKRD40Q6AI12 368 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 MIS18BP1Q6P0N0 1132 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 INO80CQ6PI98 192 aaPredicted RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 C19orf48Q6RUI8 117 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 TMEM270Q6UE05 265 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 AFTPHQ6ULP2 937 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 MFSD7Q6UXD7 560 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 LEKR1Q6ZMV7 388 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 PRR23CQ6ZRP0 262 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 RNF44Q7L0R7 432 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 GPR142Q7Z601 462 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 HID1Q8IV36 788 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 TCAIMQ8N3R3 496 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CISD2Q8N5K1 135 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 BANPQ8N9N5 519 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 LPCAT1Q8NF37 534 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CCDC26Q8TAB7 109 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 SLC22A17Q8WUG5 538 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 SLC22A18Q96BI1 424 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 EAF2Q96CJ1 260 aaPredicted RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 SLC35A4Q96G79 324 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 KAZALD1Q96I82 304 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 RAX2Q96IS3 184 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 TPD52L3Q96J77 140 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 PIWIL1Q96J94 861 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 SNX22Q96L94 193 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 GDAP1L1Q96MZ0 367 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 RBM15Q96T37 977 aaKnown RBP eCLIP5.62□□□□□ -1.51
SF1-217ENST00000486960 MIPEPQ99797 713 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 TSG101Q99816 390 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 DBNDD2Q9BQY9 259 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 NAA11Q9BSU3 229 aaPredicted RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 WDR18Q9BV38 432 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 MAGEB5Q9BZ81 275 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ASCC2Q9H1I8 757 aaPredicted RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 MTIF3Q9H2K0 278 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 AZI2Q9H6S1 392 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 DCTPP1Q9H773 170 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 FBRSL1Q9HCM7 1045 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 PRDM8Q9NQV8 689 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CNNM1Q9NRU3 951 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 SACM1LQ9NTJ5 587 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 AGPAT5Q9NUQ2 364 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 FKBP14Q9NWM8 211 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ARHGEF38Q9NXL2 777 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CLDND1Q9NY35 253 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CYP39A1Q9NYL5 469 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.62□□□□□ -1.51
SF1-217ENST00000486960 CGGBP1Q9UFW8 167 aaPredicted RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 DDX25Q9UHL0 483 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 ADAM30Q9UKF2 790 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 HSF4Q9ULV5 492 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 DDX19BQ9UMR2 479 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 DERAQ9Y315 318 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CFAP20Q9Y6A4 193 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 SPACA6W5XKT8 324 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CLCA1A8K7I4 914 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 TTC34A8MYJ7 566 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 SNAP23O00161 211 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 TRDMT1O14717 391 aaKnown RBP5.61□□□□□ -1.51
SF1-217ENST00000486960 TSPAN4O14817 238 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 PER2O15055 1255 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 ZW10O43264 779 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 TACC1O75410 805 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 MTX2O75431 263 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 CIB2O75838 187 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 AKR7A3O95154 331 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 B3GALT4O96024 378 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 PGK1P00558 417 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 ADH1AP07327 375 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 CYC1P08574 325 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 CYP3A4P08684 503 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 STAG3L3P0CL85 134 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 HOXD8P13378 290 aaPredicted RBP5.61□□□□□ -1.51
SF1-217ENST00000486960 ITGA4P13612 1032 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 TYRP14679 529 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 ETS1P14921 441 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 ACPPP15309 386 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 PTPRAP18433 802 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 ATP5JP18859 108 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 SPINK2P20155 84 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 CHRM3P20309 590 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 CASTP20810 708 aaKnown RBP5.61□□□□□ -1.51
SF1-217ENST00000486960 MCM3P25205 808 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 PTPN3P26045 913 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 EPHA8P29322 1005 aaPredicted RBP5.61□□□□□ -1.51
SF1-217ENST00000486960 GARSP41250 739 aaKnown RBP5.61□□□□□ -1.51
SF1-217ENST00000486960 LIG4P49917 911 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 CDK7P50613 346 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 AFF1P51825 1210 aaKnown RBP5.61□□□□□ -1.51
SF1-217ENST00000486960 ARHGDIBP52566 201 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 EIF3EP60228 445 aaKnown RBP5.61□□□□□ -1.51
SF1-217ENST00000486960 DSTNP60981 165 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 SSTP61278 116 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 UBE2IP63279 158 aaKnown RBP5.61□□□□□ -1.51
SF1-217ENST00000486960 CYP27A1Q02318 531 aa5.61□□□□□ -1.51
SF1-217ENST00000486960 HSPA14Q0VDF9 509 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms