RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 BBS7Q8IWZ6 715 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 UNC5BQ8IZJ1 945 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 CARNMT1Q8N4J0 409 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 ANKS4BQ8N8V4 417 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 CCDC197Q8NCU1 140 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 C2CD4AQ8NCU7 369 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 GPR150Q8NGU9 434 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 LRRC8CQ8TDW0 803 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 SH3RF2Q8TEC5 729 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 STYXQ8WUJ0 223 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 ISG20Q96AZ6 181 aaKnown RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 SEC16BQ96JE7 1060 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 LMLNQ96KR4 655 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 TDP1Q9NUW8 608 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 HACD3Q9P035 362 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 MARK1Q9P0L2 795 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 CORO1CQ9ULV4 474 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 RPL26L1Q9UNX3 145 aaKnown RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 ANKRD6Q9Y2G4 727 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 STARD13Q9Y3M8 1113 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 PSAT1Q9Y617 370 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 NYNRINQ9P2P1 1898 aaKnown RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.73□□□□□ -0.53
PRKCB-207ENST00000486868 CBX4O00257 560 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 TMCC1O94876 653 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 CRTAMO95727 393 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ARNTP27540 789 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 FOXN2P32314 431 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 IRS1P35568 1242 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 CHRNA4P43681 627 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 VASPP50552 380 aaPredicted RBP11.73□□□□□ -0.53
PRKCB-207ENST00000486868 SULT2A1Q06520 285 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ZNF77Q15935 545 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 CNGA3Q16281 694 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 PCSK7Q16549 785 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 FSTL4Q6MZW2 842 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 NEPROQ6NW34 567 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ZC3HC1Q86WB0 502 aaKnown RBP11.73□□□□□ -0.53
PRKCB-207ENST00000486868 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 NDUFAF2Q8N183 169 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 GDAP1Q8TB36 358 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ZNF398Q8TD17 642 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 DDI1Q8WTU0 396 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ZNF75CPQ92670 426 aaPredicted RBP11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ZNF707Q96C28 371 aaPredicted RBP11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ALPK3Q96L96 1907 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ZNF778Q96MU6 729 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 TDRD1Q9BXT4 1180 aaKnown RBP11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ADGRE3Q9BY15 652 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 SLC2A11Q9BYW1 496 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ANAPC1Q9H1A4 1944 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 NOD2Q9HC29 1040 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 IARS2Q9NSE4 1012 aaKnown RBP11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ABCB8Q9NUT2 735 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 VPS51Q9UID3 782 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 MID2Q9UJV3 735 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 VPS28Q9UK41 221 aa11.73□□□□□ -0.53
PRKCB-207ENST00000486868 ERICH4A6NGS2 130 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 GOLGA8RI6L899 631 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 TPP1O14773 563 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 LDB2O43679 373 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 EDF1O60869 148 aaKnown RBP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 VAPBO95292 243 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 TGDSO95455 350 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 APOA4P06727 396 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 CA3P07451 260 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 EPCAMP16422 314 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 MZF1P28698 734 aaPredicted RBP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 CRABP2P29373 138 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 TYK2P29597 1187 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 CSKP41240 450 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 LEPRP48357 1165 aaKnown RBP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 CD151P48509 253 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 SERPINB4P48594 390 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 HNRNPH2P55795 449 aaKnown RBP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 BMPR2Q13873 1038 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 PDE1CQ14123 709 aaPredicted RBP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 TEAD2Q15562 447 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 TAF1AQ15573 450 aaPredicted RBP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 RAB30Q15771 203 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 QPCTQ16769 361 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 PLEKHG6Q3KR16 790 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 CCDC153Q494R4 210 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 FSCBQ5H9T9 825 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 ATG16L1Q676U5 607 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 CLEC14AQ86T13 490 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 SLC25A41Q8N5S1 370 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 PTPRN2Q92932 1015 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 VPS39Q96JC1 886 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 FAM111AQ96PZ2 611 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 AGAP2Q99490 1192 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 KLF6Q99612 283 aaPredicted RBP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 PITPNM3Q9BZ71 974 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 MANSC1Q9H8J5 431 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms