RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 USP46P62068 366 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 MRPS35P82673 323 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 LSM12Q3MHD2 195 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 TSTD2Q5T7W7 516 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 DEFB107AQ8IZN7 70 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 CALML6Q8TD86 181 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 CYP4F11Q9HBI6 524 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 NT5MQ9NPB1 228 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 VPS45Q9NRW7 570 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 CORO1CQ9ULV4 474 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 SSX2IPQ9Y2D8 614 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 TTC3P53804 2025 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 J3KR12 359 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 NPHS1O60500 1241 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 PDHA1P08559 390 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 CPB1P15086 417 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 MAGEA11P43364 429 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 SERPINH1P50454 418 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 ERFP50548 548 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 SLC12A2P55011 1212 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 KLC1Q07866 573 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 PEX6Q13608 980 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 MARC1Q5VT66 337 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 IRGCQ6NXR0 463 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 ACAD11Q709F0 780 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 ADGRG6Q86SQ4 1221 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 ATP6V0D2Q8N8Y2 350 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 MICAL1Q8TDZ2 1067 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 LINC01599Q8WXQ3 324 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 LENG8Q96PV6 779 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 ZNF184Q99676 751 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 OMDQ99983 421 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 MRPL57Q9BQC6 102 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 CCDC28BQ9BUN5 200 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 S100A14Q9HCY8 104 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 IL37Q9NZH6 218 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 PRG3Q9Y2Y8 225 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 IGLV3-10A0A075B6K4 115 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 NEMP1O14524 444 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 SLC22A2O15244 555 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 ZMPSTE24O75844 475 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 PDE5AO76074 875 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 CNTN5O94779 1100 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 THRAP10827 490 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 HAPLN1P10915 354 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 PIK3R1P27986 724 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 CD86P42081 329 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 FAM189BP81408 668 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 NSUN2Q08J23 767 aaKnown RBP eCLIP18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 TBL3Q12788 808 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 ALFQ53S48 1182 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 VARS2Q5ST30 1063 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 CNSTQ6PJW8 725 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 KBTBD2Q8IY47 623 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 SPATA6LQ8N4H0 392 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 CPSF7Q8N684 471 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 GABPB2Q8TAK5 448 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 HEXDCQ8WVB3 486 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 JADE3Q92613 823 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 TTC1Q99614 292 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 NUF2Q9BZD4 464 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 SP110Q9HB58 689 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 CLIC5Q9NZA1 410 aa18.14■□□□□ 0.49
PDLIM7-207ENST00000486828 A6NHS1 94 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 AURKAO14965 403 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 SYN3O14994 580 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 SNUPNO95149 360 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 PAPSS2O95340 614 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 ELNP15502 786 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 EPHA3P29320 983 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 SERPINB5P36952 375 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 LEPRP48357 1165 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 DNAJB13P59910 316 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 MAXP61244 160 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 TNK2Q07912 1038 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 ITKQ08881 620 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 SLC10A7Q0GE19 358 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 EFEMP1Q12805 493 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 MSLNQ13421 630 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 CCNIQ14094 377 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 PSMD5Q16401 504 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 RBM20Q5T481 1227 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 TRAF7Q6Q0C0 670 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 FBXW8Q8N3Y1 598 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 TEX26Q8N6G2 289 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 RAET1EQ8TD07 263 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 BTN2A3PQ96KV6 586 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 KLHL5Q96PQ7 755 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 ZNF385DQ9H6B1 395 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 IGSF5Q9NSI5 407 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 CDYLQ9Y232 598 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 BRCA2P51587 3418 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 FAM92AA1XBS5 289 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 BAG2O95816 211 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 MMP2P08253 660 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 ADSLP30566 484 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 PPARGP37231 505 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 CLCN5P51795 746 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 ACLYP53396 1101 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms