RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CD302Q8IX05 232 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 CDH26Q8IXH8 852 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 ST13P4Q8IZP2 240 aaPredicted RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 FAM98AQ8NCA5 519 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 FAM156AQ8NDB6 213 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 IPMKQ8NFU5 416 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 OR52K1Q8NGK4 314 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 FBXO30Q8TB52 745 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 ACTRT2Q8TDY3 377 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 HSPH1Q92598 858 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 ZNF274Q96GC6 653 aaPredicted RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 FBXL20Q96IG2 436 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 NTPCRQ9BSD7 190 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 TIPINQ9BVW5 301 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 NUSAP1Q9BXS6 441 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 LMAN2LQ9H0V9 348 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 SNX25Q9H3E2 840 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 FANCEQ9HB96 536 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 EHD3Q9NZN3 535 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 LARSQ9P2J5 1176 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 COG5Q9UP83 839 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 COL11A2P13942 1736 aaPredicted RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 NCOA1Q15788 1441 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 UACAQ9BZF9 1416 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 RAB3GAP2Q9H2M9 1393 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 MROH5Q6ZUA9 1318 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 A0A087WWL8 130 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 A0A0G2JPF8 293 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 GOLGA8QA0A0J9YX86 632 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 A0A1W2PQ67 120 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 GOLGA8OA6NCC3 632 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 SLC9B1P1A6NJY1 282 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 MIF4GDA9UHW6 222 aaKnown RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 TMEM233B4DJY2 109 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 HNRNPCL3B7ZW38 293 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 GOLGA8NF8WBI6 632 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 BTN3A1O00481 513 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 HNRNPRO43390 633 aaKnown RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 SUV39H1O43463 412 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 TRIAP1O43715 76 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 SPOPO43791 374 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 STX10O60499 249 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 NIPSNAP2O75323 286 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 KLHL2O95198 593 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 TGDSO95455 350 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ERBB2P04626 1255 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 FYNP06241 537 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 SNRPAP09012 282 aaKnown RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 UBTFL6P0CB48 400 aaPredicted RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 HNRNPCL4P0DMR1 293 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ATP6V1B1P15313 513 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 EN2P19622 333 aaPredicted RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 ACAT1P24752 427 aaKnown RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 CD6P30203 668 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 IFNA8P32881 189 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 SLC1A1P43005 524 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ATP5OP48047 213 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 TM4SF4P48230 202 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 PPM1FP49593 454 aaPredicted RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 MAP3K7CLP57077 242 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 CCNA1P78396 465 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 GSTO1P78417 241 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ITGA9Q13797 1035 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 TRIM14Q14142 442 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 CASP8Q14790 479 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ALX1Q15699 326 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ZIK1Q3SY52 487 aaPredicted RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 ODF2Q5BJF6 829 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 CLVS2Q5SYC1 327 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 INTS11Q5TA45 600 aaKnown RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 GRTP1Q5TC63 336 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 VWA5B1Q5TIE3 1220 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ALS2CLQ60I27 953 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 KIF6Q6ZMV9 814 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 IDO2Q6ZQW0 420 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 C1orf122Q6ZSJ8 110 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 GPR142Q7Z601 462 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ZNF280BQ86YH2 543 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 GATAD2AQ86YP4 633 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 DNAJC5GQ8N7S2 189 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 SLC4A11Q8NBS3 891 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 B3GALNT2Q8NCR0 500 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 PPFIBP2Q8ND30 876 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 TTLQ8NG68 377 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 OR6S1Q8NH40 331 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 EXD1Q8NHP7 514 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 RFKQ969G6 155 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 TTC17Q96AE7 1141 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 CIDECQ96AQ7 238 aaPredicted RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 CCDC127Q96BQ5 260 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 OPALINQ96PE5 141 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 MPHOSPH8Q99549 860 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 CTRCQ99895 268 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 SYT15Q9BQS2 421 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 ACTRT3Q9BYD9 372 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 CRNKL1Q9BZJ0 848 aaKnown RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 ELAC1Q9H777 363 aaKnown RBP5.59□□□□□ -1.51
COPS3-209ENST00000486810 NTN4Q9HB63 628 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 CRLF2Q9HC73 371 aa5.59□□□□□ -1.51
COPS3-209ENST00000486810 CNNM1Q9NRU3 951 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms