RNA–Protein interactions for RNA: ENST00000486539.1

CACNA2D1-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 5

Gene CACNA2D1, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-211ENST00000486539 FBXO40Q9UH90 709 aa2.69□□□□□ -1.98
CACNA2D1-211ENST00000486539 NOB1Q9ULX3 412 aaKnown RBP2.69□□□□□ -1.98
CACNA2D1-211ENST00000486539 KRTAP4-16G5E9R7 235 aaPredicted RBP2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 CCNT1O60563 726 aaKnown RBP2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 RFPL2O75678 378 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 PDGFRBP09619 1106 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 GATA1P15976 413 aaPredicted RBP2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 CLK1P49759 484 aaKnown RBP2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 ALDH18A1P54886 795 aaKnown RBP2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 SF3A3Q12874 501 aaKnown RBP eCLIP2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 ARL13BQ3SXY8 428 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 TBRG1Q3YBR2 411 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 ATP13A5Q4VNC0 1218 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 RAPH1Q70E73 1250 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 RNF144BQ7Z419 303 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 GALNT7Q86SF2 657 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 MB21D2Q8IYB1 491 aaPredicted RBP2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 VPS52Q8N1B4 723 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 OR4N2Q8NGD1 307 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 C2CD4CQ8TF44 421 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 FSD1Q9BTV5 496 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 APOL5Q9BWW9 433 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 ERVMER34-1Q9H9K5 563 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 ZDHHC18Q9NUE0 388 aa2.68□□□□□ -1.98
CACNA2D1-211ENST00000486539 NPIPB13A6NJU9 1138 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 NPIPB5A8MRT5 1133 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 NPIPB4C9JG80 1138 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 NR5A2O00482 541 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 KRTAP1-4P0C5Y4 121 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 CDH1P12830 882 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 KLRK1P26718 216 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 SKIV2L2P42285 1042 aaKnown RBP2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 CASP5P51878 434 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 GNB1P62873 340 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 MRPS5P82675 430 aaKnown RBP2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 CDK18Q07002 472 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 GRM3Q14832 879 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 AMZ1Q400G9 498 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 IRAK1BP1Q5VVH5 260 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 FBXO38Q6PIJ6 1188 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 KIAA1324Q6UXG2 1013 aaKnown RBP2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 ERC1Q8IUD2 1116 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 SCN4BQ8IWT1 228 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 TXLNBQ8N3L3 684 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 GALNT15Q8N3T1 639 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 CYYR1Q96J86 154 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 LRR1Q96L50 414 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 CSF3RQ99062 836 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 OPRPNQ99935 248 aaPredicted RBP2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 LRRC1Q9BTT6 524 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 TM7SF3Q9NS93 570 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 LIN7CQ9NUP9 197 aaKnown RBP2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 HCFC1R1Q9NWW0 138 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 SLC9A2Q9UBY0 812 aa2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 NOP58Q9Y2X3 529 aaKnown RBP2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 FRMPD2Q68DX3 1309 aaPredicted RBP2.67□□□□□ -1.98
CACNA2D1-211ENST00000486539 AGAP5A6NIR3 686 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 GRM8O00222 908 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 HSPA12AO43301 675 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 ARHGEF9O43307 516 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 DHX16O60231 1041 aaKnown RBP2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 STT3AP46977 705 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 CDK7P50613 346 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 PTPROQ16827 1216 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 TRIM60Q495X7 471 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 FAM198BQ6UWH4 519 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 CCNI2Q6ZMN8 369 aaPredicted RBP2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 SHFQ7M4L6 423 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 DENND6AQ8IWF6 608 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 SCAIQ8N9R8 606 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 ZMIZ2Q8NF64 920 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 CREB3L4Q8TEY5 395 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 TMEM190Q8WZ59 177 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 RBM4BQ9BQ04 359 aaKnown RBP2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 PLEKHA5Q9HAU0 1116 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 UPB1Q9UBR1 384 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 LZTS1Q9Y250 596 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 PCDHA10Q9Y5I2 948 aa2.66□□□□□ -1.98
CACNA2D1-211ENST00000486539 HNRNPDLO14979 420 aaKnown RBP2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 KPNA5O15131 536 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 TFRCP02786 760 aaKnown RBP2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 HLA-DOBP13765 273 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 NPPBP16860 134 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 IBSPP21815 317 aaPredicted RBP2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 AKT1P31749 480 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 RELQ04864 619 aaPredicted RBP2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 ZC3HC1Q86WB0 502 aaKnown RBP2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 SFTPA2Q8IWL1 248 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 SLC2A12Q8TD20 617 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 RSC1A1Q92681 617 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 ATOH1Q92858 354 aaPredicted RBP2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 WDR6Q9NNW5 1121 aaKnown RBP2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 NOX4Q9NPH5 578 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 KCNS2Q9ULS6 477 aa2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 ATXN2Q99700 1313 aaKnown RBP2.65□□□□□ -1.99
CACNA2D1-211ENST00000486539 TRIOBPQ9H2D6 2365 aa2.64□□□□□ -1.99
CACNA2D1-211ENST00000486539 HOXA1P49639 335 aaPredicted RBP2.64□□□□□ -1.99
CACNA2D1-211ENST00000486539 GALEQ14376 348 aa2.64□□□□□ -1.99
CACNA2D1-211ENST00000486539 WDR20Q8TBZ3 569 aa2.64□□□□□ -1.99
CACNA2D1-211ENST00000486539 OTUD7AQ8TE49 926 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms