RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 NEK3P51956 506 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 PTPN5P54829 565 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 CCDC15Q0P6D6 951 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 SNX1Q13596 522 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 SLC14A2Q15849 920 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 CYP1B1Q16678 543 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 ANKRD20A2Q5SQ80 823 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 FAM182AQ5T1J6 154 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 PIP5KL1Q5T9C9 394 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 ANKRD20A1Q5TYW2 823 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 AGBL4Q5VU57 503 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 ANKRD20A3Q5VUR7 823 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 ITPRIPL1Q6GPH6 555 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 ZC3H14Q6PJT7 736 aaKnown RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 ERN2Q76MJ5 926 aaKnown RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 PARS2Q7L3T8 475 aaKnown RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 PID1Q7Z2X4 250 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 C11orf74Q86VG3 221 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 C12orf50Q8NA57 414 aaPredicted RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 GANCQ8TET4 914 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 ECHDC3Q96DC8 303 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 RTP4Q96DX8 246 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 IMP4Q96G21 291 aaKnown RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 SPATA13Q96N96 652 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 RNF14Q9UBS8 474 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 ZNF148Q9UQR1 794 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 DRG1Q9Y295 367 aaKnown RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 HCN4Q9Y3Q4 1203 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 GOLGA6L10A0A0M3HER8 536 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 C16orf96A6NNT2 1141 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 PLK4O00444 970 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 HTRA2O43464 458 aaPredicted RBP20.11■□□□□ 0.81
COL6A2-208ENST00000485591 OPHN1O60890 802 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 MMP2P08253 660 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 NFKB1P19838 968 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 GDF10P55107 478 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 TRAF2Q12933 501 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 IHHQ14623 411 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 BRAT1Q6PJG6 821 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 SLC36A4Q6YBV0 504 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 FAM124AQ86V42 546 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL6A2-208ENST00000485591 FAM160A2Q8N612 972 aaPredicted RBP20.11■□□□□ 0.81
COL6A2-208ENST00000485591 FRMD1Q8N878 549 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 FAM71DQ8N9W8 422 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 SPOCK2Q92563 424 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 TADA1Q96BN2 335 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 CAPZA3Q96KX2 299 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 FCRL5Q96RD9 977 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 AP1M1Q9BXS5 423 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 BTBD1Q9H0C5 482 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 GBA3Q9H227 469 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 NEUROG2Q9H2A3 272 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 SGK2Q9HBY8 427 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 WSB2Q9NYS7 404 aaPredicted RBP20.11■□□□□ 0.81
COL6A2-208ENST00000485591 MBD1Q9UIS9 605 aaPredicted RBP20.11■□□□□ 0.81
COL6A2-208ENST00000485591 INVSQ9Y283 1065 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 PCDHGC4Q9Y5F7 938 aa20.11■□□□□ 0.81
COL6A2-208ENST00000485591 TNRC6BQ9UPQ9 1833 aaKnown RBP20.11■□□□□ 0.81
COL6A2-208ENST00000485591 A0A1W2PQ67 120 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 HRO43593 1189 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 GCATO75600 419 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 ADRB3P13945 408 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 CA4P22748 312 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 CD86P42081 329 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 ADPRHP54922 357 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 SKOR1P84550 965 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 SRSF5Q13243 272 aaKnown RBP20.1■□□□□ 0.81
COL6A2-208ENST00000485591 P3H1Q32P28 736 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 CFAP58Q5T655 872 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 FBXL19Q6PCT2 694 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.1■□□□□ 0.81
COL6A2-208ENST00000485591 PRPF39Q86UA1 669 aaKnown RBP20.1■□□□□ 0.81
COL6A2-208ENST00000485591 CCDC110Q8TBZ0 833 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 TOE1Q96GM8 510 aaKnown RBP20.1■□□□□ 0.81
COL6A2-208ENST00000485591 TDRD1Q9BXT4 1180 aaKnown RBP20.1■□□□□ 0.81
COL6A2-208ENST00000485591 RSPH14Q9UHP6 348 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 RAI2Q9Y5P3 530 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 SPAG17Q6Q759 2223 aa20.1■□□□□ 0.81
COL6A2-208ENST00000485591 NUMA1Q14980 2115 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 THADAQ6YHU6 1953 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 PLRG1O43660 514 aaKnown RBP20.09■□□□□ 0.81
COL6A2-208ENST00000485591 PHF2O75151 1096 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 BCKDHBP21953 392 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 ACSL1P33121 698 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 SUOXP51687 545 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 ZSWIM9Q86XI8 627 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 RAB7BQ96AH8 199 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 RBM15Q96T37 977 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL6A2-208ENST00000485591 KDM4CQ9H3R0 1056 aa20.09■□□□□ 0.81
COL6A2-208ENST00000485591 UPK3BL1B0FP48 263 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 UPK3BL2E5RIL1 263 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 FZD6O60353 706 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 PGLSO95336 258 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 SEMA4FO95754 770 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 ABL2P42684 1182 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 PAFAH1B1P43034 410 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 TAS2R38P59533 333 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 UGP2Q16851 508 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 ARMC12Q5T9G4 340 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms