RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 DLG2Q15700 870 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 ZNF470Q6ECI4 717 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 CCDC149Q6ZUS6 474 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 GAREM2Q75VX8 874 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 MICALL1Q8N3F8 863 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 OR6Y1Q8NGX8 325 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 GABPB2Q8TAK5 448 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-225ENST00000483495 IFT43Q96FT9 208 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 CINPQ9BW66 212 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-225ENST00000483495 C1QTNF1Q9BXJ1 281 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 MFSD1Q9H3U5 465 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SLC39A10Q9ULF5 831 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 ACTL7AQ9Y615 435 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 IRAK3Q9Y616 596 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 CPQQ9Y646 472 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 ZMPSTE24O75844 475 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 CXCL14O95715 111 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 NDST3O95803 873 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 C1RP00736 705 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 ADH1AP07327 375 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 COL6A2P12110 1019 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 CD151P48509 253 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 IRX4P78413 519 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 SLC7A9P82251 487 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 USP10Q14694 798 aaKnown RBP13.35□□□□□ -0.27
CPNE1-225ENST00000483495 CYTH1Q15438 398 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 RNF219Q5W0B1 726 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-225ENST00000483495 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 MFSD6LQ8IWD5 586 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 LMNTD2Q8IXW0 634 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 HJURPQ8NCD3 748 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-225ENST00000483495 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-225ENST00000483495 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 C20orf27Q9GZN8 174 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 MYLK2Q9H1R3 596 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 RASSF4Q9H2L5 321 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 NOD2Q9HC29 1040 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 ZNF358Q9NW07 568 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-225ENST00000483495 DCTN4Q9UJW0 460 aa13.35□□□□□ -0.27
CPNE1-225ENST00000483495 ARIH1Q9Y4X5 557 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-225ENST00000483495 CCDC195A0A1B0GUA6 201 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-225ENST00000483495 INSIG1O15503 277 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 CD160O95971 181 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 LRG1P02750 347 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 SERPINE1P05121 402 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 SLC35E2BP0CK96 405 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 CPA3P15088 417 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 PFKLP17858 780 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 GRK2P25098 689 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 GABRR2P28476 465 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 GMPRP36959 345 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 RGRP47804 291 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 LEPRP48357 1165 aaKnown RBP13.34□□□□□ -0.27
CPNE1-225ENST00000483495 ARFIP2P53365 341 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 NCALDP61601 193 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 ARF5P84085 180 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 IRF9Q00978 393 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 NSUN2Q08J23 767 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPNE1-225ENST00000483495 C10orf107Q8IVU9 208 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 BRSK1Q8TDC3 778 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 MRPS31Q92665 395 aaKnown RBP13.34□□□□□ -0.27
CPNE1-225ENST00000483495 ERP27Q96DN0 273 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 NSMCE3Q96MG7 304 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 KCNK4Q9NYG8 393 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 TLK1Q9UKI8 766 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 OR51B4Q9Y5P0 310 aa13.34□□□□□ -0.27
CPNE1-225ENST00000483495 FAM95CA0A1B0GW59 222 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 G3V2L1 256 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 CBX4O00257 560 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 TBL1XO60907 577 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 DNAJC6O75061 913 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 LUC7L3O95232 432 aaKnown RBP13.33□□□□□ -0.27
CPNE1-225ENST00000483495 APOA4P06727 396 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 C8AP07357 584 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 KCNA4P22459 653 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 CRABP2P29373 138 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 RAB10P61026 200 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 POU4F1Q01851 419 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 FPGSQ05932 587 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 ILF2Q12905 390 aaKnown RBP13.33□□□□□ -0.27
CPNE1-225ENST00000483495 SLC12A1Q13621 1099 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 TAF1BQ53T94 588 aaPredicted RBP13.33□□□□□ -0.27
CPNE1-225ENST00000483495 INO80DQ53TQ3 878 aaPredicted RBP13.33□□□□□ -0.27
CPNE1-225ENST00000483495 HTR3DQ70Z44 454 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 TMC7Q7Z402 723 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 CRLF3Q8IUI8 442 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 HS6ST3Q8IZP7 471 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 TMA16Q96EY4 203 aaKnown RBP13.33□□□□□ -0.27
CPNE1-225ENST00000483495 NUDCD1Q96RS6 583 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 TMEM120AQ9BXJ8 343 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 MUC3BQ9H195 1237 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 ECT2Q9H8V3 914 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 NMRAL1Q9HBL8 299 aa13.33□□□□□ -0.27
CPNE1-225ENST00000483495 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.33□□□□□ -0.272e-16■■■□□ 16.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms