RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ITGB7P26010 798 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 HOXA6P31267 233 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 KDELC2Q7Z4H8 507 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 ZSWIM9Q86XI8 627 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 CCDC89Q8N998 374 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 GLIS1Q8NBF1 620 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 NEUROG2Q9H2A3 272 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 ITM2CQ9NQX7 267 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 HOMER3Q9NSC5 361 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 TRHDEQ9UKU6 1024 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 FAM47DPA6NHR8 397 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 C16orf96A6NNT2 1141 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 PHF2O75151 1096 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 ZNF217O75362 1048 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 PRKCGP05129 697 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 PSMB4P28070 264 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 P2RY2P41231 377 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 NUBP1P53384 320 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 GRM3Q14832 879 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 USP39Q53GS9 565 aaKnown RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 FAXCQ5TGI0 409 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 DRICH1Q6PGQ1 229 aaPredicted RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 CCDC137Q6PK04 289 aaKnown RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 ARHGEF18Q6ZSZ5 1173 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 PRPF39Q86UA1 669 aaKnown RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 WDR5BQ86VZ2 330 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 IMP4Q96G21 291 aaKnown RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 SPACA7Q96KW9 195 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 DDX47Q9H0S4 455 aaKnown RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 SLC25A51Q9H1U9 297 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 GBA3Q9H227 469 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 SCML1Q9UN30 329 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 NCKAP1Q9Y2A7 1128 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 PCDHB9Q9Y5E1 797 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 RAI2Q9Y5P3 530 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 PRR23AA6NEV1 266 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 TRAFD1O14545 582 aaPredicted RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 ZSCAN5DPP0CG00 497 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 ACSL1P33121 698 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 SKOR1P84550 965 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 MAP7D1Q3KQU3 841 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 ZNF528Q3MIS6 628 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 AGBL4Q5VU57 503 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 ITPRIPL1Q6GPH6 555 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 FBXL19Q6PCT2 694 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 ERN2Q76MJ5 926 aaKnown RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 C12orf50Q8NA57 414 aaPredicted RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 TDRD1Q9BXT4 1180 aaKnown RBP18■□□□□ 0.47
CPNE1-224ENST00000483359 ZSCAN32Q9NX65 697 aa18■□□□□ 0.47
CPNE1-224ENST00000483359 IGHV1OR15-9A0A0B4J2B8 117 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 CCDC163A0A0D9SF12 145 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 C5orf60A6NFR6 353 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 OPHN1O60890 802 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 PMPCBO75439 489 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 ADRB3P13945 408 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 BCKDHBP21953 392 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 STIP1P31948 543 aaKnown RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 COILP38432 576 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 NEK3P51956 506 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 TCF15Q12870 199 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 NUMA1Q14980 2115 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 TRIP13Q15645 432 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 CYP1B1Q16678 543 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 RALGPS1Q5JS13 557 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 SYCP2LQ5T4T6 812 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 PIP5KL1Q5T9C9 394 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 KBTBD6Q86V97 674 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 KLHL7Q8IXQ5 586 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 OR14C36Q8NHC7 312 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 KIF18AQ8NI77 898 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 TOE1Q96GM8 510 aaKnown RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 OXNAD1Q96HP4 312 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 ZNF641Q96N77 438 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 GORASP1Q9BQQ3 440 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 CHKBQ9Y259 395 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 ITM2BQ9Y287 266 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 R4GN57 208 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 SOCS5O75159 536 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 RPP40O75818 363 aaKnown RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 TUBB4AP04350 444 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 PDHA1P08559 390 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 CD6P30203 668 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 SEMG2Q02383 582 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 P3H1Q32P28 736 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 USP30Q70CQ3 517 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 TTC7BQ86TV6 843 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 DEFB119Q8N690 84 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 RTP4Q96DX8 246 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 FCRL5Q96RD9 977 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 FAM126AQ9BYI3 521 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 BTBD1Q9H0C5 482 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 RNF14Q9UBS8 474 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 GGT7Q9UJ14 662 aa17.99■□□□□ 0.47
CPNE1-224ENST00000483359 DRG1Q9Y295 367 aaKnown RBP17.99■□□□□ 0.47
CPNE1-224ENST00000483359 GCATO75600 419 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 ZNF189O75820 626 aaPredicted RBP17.98■□□□□ 0.47
CPNE1-224ENST00000483359 METTL18O95568 372 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 ITIH2P19823 946 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 XPAP23025 273 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms