RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PLEKHA2Q9HB19 425 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 PTPRHQ9HD43 1115 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 WDR6Q9NNW5 1121 aaKnown RBP3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 TMEM51Q9NW97 253 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 A0A096LPK6 155 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 MAGEA13PA6NCF6 341 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 OR6C68A6NDL8 312 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 FAM157AC9JC47 383 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 J3KR12 359 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 SKAP2O75563 359 aaPredicted RBP3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 CSF1P09603 554 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 AMD1P17707 334 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 SSTR2P30874 369 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 GPR12P47775 334 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 MTNR1AP48039 350 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 PEX5P50542 639 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 MVDP53602 400 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 BIRC3Q13489 604 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 BYSLQ13895 437 aaKnown RBP3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 CAPSQ13938 189 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 RBM39Q14498 530 aaKnown RBP3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 KCTD2Q14681 263 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 PDCD2Q16342 344 aaPredicted RBP3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 SETMARQ53H47 684 aaPredicted RBP3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 RUNDC3AQ59EK9 446 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 C9orf139Q6ZV77 190 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 FAM9BQ8IZU0 186 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 NAGSQ8N159 534 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 GALNT15Q8N3T1 639 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 ANKRD44Q8N8A2 993 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 FSIP1Q8NA03 581 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 PPHLN1Q8NEY8 458 aaKnown RBP3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 POF1BQ8WVV4 589 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 SORCS1Q8WY21 1168 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 EPYCQ99645 322 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 WDR12Q9GZL7 423 aaKnown RBP3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 LUZP4Q9P127 313 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 LRFN1Q9P244 771 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 NRBP1Q9UHY1 535 aa3.21□□□□□ -1.9
LAPTM4A-202ENST00000483117 H0Y3Z8 333 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 ACKR2O00590 384 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 TCERG1O14776 1098 aaKnown RBP3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 ANP32CO43423 234 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 SLC25A17O43808 307 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 KIF1CO43896 1103 aaKnown RBP3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 KRT38O76015 456 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 IL1AP01583 271 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 LDHCP07864 332 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 FMO4P31512 558 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 HALP42357 657 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 ARHGAP8P85298 464 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 FAM27E3Q08E93 113 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 TRIM14Q14142 442 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 IL13RA2Q14627 380 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 LPIN1Q14693 890 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 PUM3Q15397 648 aaKnown RBP3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 ME3Q16798 604 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 HYIQ5T013 277 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 MMS22LQ6ZRQ5 1243 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 RINLQ6ZS11 566 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 EXOC3L1Q86VI1 746 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 DCUN1D3Q8IWE4 304 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 CCDC89Q8N998 374 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 LMNTD1Q8N9Z9 388 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 STT3BQ8TCJ2 826 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 TRIM63Q969Q1 353 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 TBATAQ96M53 351 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 CRB3Q9BUF7 120 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 DDX23Q9BUQ8 820 aaKnown RBP3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 TLR8Q9NR97 1041 aaKnown RBP3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 TMLHEQ9NVH6 421 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 HDAC6Q9UBN7 1215 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 FBXO40Q9UH90 709 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 NOTCH3Q9UM47 2321 aa3.2□□□□□ -1.9
LAPTM4A-202ENST00000483117 E7EVH7 732 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 VNN2O95498 520 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 HSD3B1P14060 373 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 CD72P21854 359 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 CALRP27797 417 aaKnown RBP3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 PNPLA4P41247 253 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 TNFAIP2Q03169 654 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 TBX2Q13207 712 aaPredicted RBP3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 THOC5Q13769 683 aaKnown RBP3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 PDE1CQ14123 709 aaPredicted RBP3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 RPE65Q16518 533 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 FBXO43Q4G163 708 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 NCAPH2Q6IBW4 605 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 MB21D2Q8IYB1 491 aaPredicted RBP3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 AADATQ8N5Z0 425 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 SPATA5Q8NB90 893 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 C1orf131Q8NDD1 294 aaKnown RBP3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 SETD9Q8NE22 299 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 MCPH1Q8NEM0 835 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 CSGALNACT1Q8TDX6 532 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 OTUD7AQ8TE49 926 aaPredicted RBP3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 SECTM1Q8WVN6 248 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 TRIB2Q92519 343 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 CD101Q93033 1021 aa3.19□□□□□ -1.9
LAPTM4A-202ENST00000483117 SKA1Q96BD8 255 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms