RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PPIDQ08752 370 aaKnown RBP16.78■□□□□ 0.28
HMGN1-214ENST00000482733 BRAT1Q6PJG6 821 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 ZCCHC9Q8N567 271 aaKnown RBP16.78■□□□□ 0.28
HMGN1-214ENST00000482733 C1orf216Q8TAB5 229 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 OLFM3Q96PB7 478 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 NUDCD1Q96RS6 583 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 SMOC1Q9H4F8 434 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 CAPN10Q9HC96 672 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 DMTF1Q9Y222 760 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 FADS3Q9Y5Q0 445 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.78■□□□□ 0.28
HMGN1-214ENST00000482733 GVINP1Q7Z2Y8 2422 aa16.78■□□□□ 0.28
HMGN1-214ENST00000482733 PTPRZ1P23471 2315 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-214ENST00000482733 A0A1W2PQ67 120 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 TSPAN11A1L157 253 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 PATE3B3GLJ2 98 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 MUSKO15146 869 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 TSPAN6O43657 245 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 RNGTTO60942 597 aaKnown RBP16.77■□□□□ 0.28
HMGN1-214ENST00000482733 PCDH8O95206 1070 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 PIGNO95427 931 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 SYPP08247 313 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 KRT10P13645 584 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 CCNB1P14635 433 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 CR2P20023 1033 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 SDHBP21912 280 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 XPAP23025 273 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-214ENST00000482733 PTPN7P35236 360 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 PEX5P50542 639 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 AFF3P51826 1226 aaKnown RBP16.77■□□□□ 0.28
HMGN1-214ENST00000482733 PPP2CBP62714 309 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 PPP2CAP67775 309 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 TEAD4Q15561 434 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 SETMARQ53H47 684 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-214ENST00000482733 KAZNQ674X7 775 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 TCEAL6Q6IPX3 200 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 KIAA1161Q6NSJ0 714 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 TTC7BQ86TV6 843 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 HORMAD1Q86X24 394 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 TCEAL3Q969E4 200 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 FEM1CQ96JP0 617 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 ZDHHC5Q9C0B5 715 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 POLR1EQ9GZS1 481 aaKnown RBP16.77■□□□□ 0.28
HMGN1-214ENST00000482733 SCUBE2Q9NQ36 999 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 RBM22Q9NW64 420 aaKnown RBP eCLIP16.77■□□□□ 0.283e-6■■□□□ 11.7
HMGN1-214ENST00000482733 GUCA1BQ9UMX6 200 aa16.77■□□□□ 0.28
HMGN1-214ENST00000482733 NYNRINQ9P2P1 1898 aaKnown RBP16.76■□□□□ 0.27
HMGN1-214ENST00000482733 A0A1W2PQU0 124 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 NEMP1O14524 444 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 SOCS5O75159 536 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 POLR2LP62875 67 aaKnown RBP16.76■□□□□ 0.27
HMGN1-214ENST00000482733 RPS21P63220 83 aaKnown RBP16.76■□□□□ 0.27
HMGN1-214ENST00000482733 RACK1P63244 317 aaKnown RBP16.76■□□□□ 0.27
HMGN1-214ENST00000482733 IRX4P78413 519 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 BBS12Q6ZW61 710 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 CAMK1DQ8IU85 385 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 PGBD5Q8N414 524 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 NETO1Q8TDF5 533 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 P3H4Q92791 437 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 SKA1Q96BD8 255 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 LGMNQ99538 433 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 ORAI3Q9BRQ5 295 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 TM9SF3Q9HD45 589 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 NT5MQ9NPB1 228 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 CAPN6Q9Y6Q1 641 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 SDK1Q7Z5N4 2213 aa16.76■□□□□ 0.27
HMGN1-214ENST00000482733 NUP205Q92621 2012 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 LNP1A1A4G5 178 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 AREL1O15033 823 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 FTCDO95954 541 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 PTMAP06454 111 aaKnown RBP16.75■□□□□ 0.27
HMGN1-214ENST00000482733 TIMP2P16035 220 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 ABL2P42684 1182 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 GRIA4P48058 902 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 LIMK1P53667 647 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 ATXN3P54252 364 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-214ENST00000482733 IFI35P80217 286 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-214ENST00000482733 ITKQ08881 620 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 ELP6Q0PNE2 266 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 AP1B1Q10567 949 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 UGP2Q16851 508 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 SLC45A4Q5BKX6 768 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 ALG1LQ6GMV1 187 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 NAPEPLDQ6IQ20 393 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 ERAP2Q6P179 960 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 NPNTQ6UXI9 565 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 PAF1Q8N7H5 531 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 SPOCK2Q92563 424 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 ECHDC3Q96DC8 303 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 ALS2CR12Q96Q35 445 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 EDEM2Q9BV94 578 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 OSBPL8Q9BZF1 889 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 NOD2Q9HC29 1040 aa16.75■□□□□ 0.27
HMGN1-214ENST00000482733 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.74■□□□□ 0.27
HMGN1-214ENST00000482733 UPK3BL1B0FP48 263 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 UPK3BL2E5RIL1 263 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 PRAMEF26H0Y7S4 382 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 TRAFD1O14545 582 aaPredicted RBP16.74■□□□□ 0.27
HMGN1-214ENST00000482733 ARHGAP33O14559 1287 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 TJP3O95049 919 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms