RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 LRRC10BA6NIK2 292 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 AREL1O15033 823 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 INSIG1O15503 277 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 FGF10O15520 208 aaPredicted RBP15.43■□□□□ 0.06
LIMS3-203ENST00000480744 AQP9O43315 295 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 TM7SF2O76062 418 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 IGFALSP35858 605 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 EIF2S3P41091 472 aaKnown RBP15.43■□□□□ 0.06
LIMS3-203ENST00000480744 PFN3P60673 137 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 OGDHQ02218 1023 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 EIF2B5Q13144 721 aaKnown RBP15.43■□□□□ 0.06
LIMS3-203ENST00000480744 SERINC3Q13530 473 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 CDKN3Q16667 212 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 INO80DQ53TQ3 878 aaPredicted RBP15.43■□□□□ 0.06
LIMS3-203ENST00000480744 PPP1R15BQ5SWA1 713 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 CCDC183Q5T5S1 534 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 ZCCHC8Q6NZY4 707 aaKnown RBP15.43■□□□□ 0.06
LIMS3-203ENST00000480744 APTXQ7Z2E3 356 aaKnown RBP15.43■□□□□ 0.06
LIMS3-203ENST00000480744 RBFAQ8N0V3 343 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 CACTIN-AS1Q8N1I8 211 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 IFI44Q8TCB0 444 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 MAPK15Q8TD08 544 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 ASB12Q8WXK4 309 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 BAP1Q92560 729 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 DEPDC7Q96QD5 511 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 IL12RB2Q99665 862 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 C1QTNF7Q9BXJ2 289 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 HSD3B7Q9H2F3 369 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 TAS2R14Q9NYV8 317 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 LHX3Q9UBR4 397 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 UBA2Q9UBT2 640 aaPredicted RBP15.43■□□□□ 0.06
LIMS3-203ENST00000480744 APOBEC3BQ9UH17 382 aaKnown RBP15.43■□□□□ 0.06
LIMS3-203ENST00000480744 U3KQA8 63 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 RP1P56715 2156 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 WASH4PA8MWX3 477 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 ATMINO43313 823 aaPredicted RBP15.42■□□□□ 0.06
LIMS3-203ENST00000480744 CSO75390 466 aaKnown RBP15.42■□□□□ 0.06
LIMS3-203ENST00000480744 PIGNO95427 931 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 MBD3O95983 291 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 TIMP2P16035 220 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 PSMA2P25787 234 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 ACTN2P35609 894 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 AIF1P55008 147 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 TYRO3Q06418 890 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 C1orf61Q13536 156 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 PTK2BQ14289 1009 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 CYTH1Q15438 398 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 KLHL40Q2TBA0 621 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 CFAP58Q5T655 872 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 UMODL1-AS1Q8N2C9 162 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 FAM181AQ8N9Y4 354 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 BTN2A2Q8WVV5 523 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 FGF11Q92914 225 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 CENPTQ96BT3 561 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 CELF6Q96J87 481 aaKnown RBP15.42■□□□□ 0.06
LIMS3-203ENST00000480744 TCEAL2Q9H3H9 227 aaPredicted RBP15.42■□□□□ 0.06
LIMS3-203ENST00000480744 DHX35Q9H5Z1 703 aaKnown RBP15.42■□□□□ 0.06
LIMS3-203ENST00000480744 USP29Q9HBJ7 922 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 SPASTQ9UBP0 616 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 DKK3Q9UBP4 350 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 AP4E1Q9UPM8 1137 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 CSNK1G3Q9Y6M4 447 aa15.42■□□□□ 0.06
LIMS3-203ENST00000480744 LRP4O75096 1905 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 EIF4E1BA6NMX2 242 aaKnown RBP15.41■□□□□ 0.06
LIMS3-203ENST00000480744 EEF2KO00418 725 aaKnown RBP15.41■□□□□ 0.06
LIMS3-203ENST00000480744 TEX33O43247 280 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 GP1BAP07359 652 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 ELP6Q0PNE2 266 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 CCDC173Q0VFZ6 552 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 PRRT3Q5FWE3 981 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 FAXCQ5TGI0 409 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 CDCP2Q5VXM1 449 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 GUSBP11Q6P575 273 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 CRTC1Q6UUV9 634 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 EFL1Q7Z2Z2 1120 aaKnown RBP15.41■□□□□ 0.06
LIMS3-203ENST00000480744 IRF2BP2Q7Z5L9 587 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 DNAAF5Q86Y56 855 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 PHACTR4Q8IZ21 702 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 PAF1Q8N7H5 531 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 SNIP1Q8TAD8 396 aaKnown RBP15.41■□□□□ 0.06
LIMS3-203ENST00000480744 SLC13A1Q9BZW2 595 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 NAT10Q9H0A0 1025 aaKnown RBP15.41■□□□□ 0.06
LIMS3-203ENST00000480744 MBNL1Q9NR56 388 aaKnown RBP15.41■□□□□ 0.06
LIMS3-203ENST00000480744 PARVAQ9NVD7 372 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 PCSK1NQ9UHG2 260 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 COQ6Q9Y2Z9 468 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 MFHAS1Q9Y4C4 1052 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 KIF26BQ2KJY2 2108 aa15.41■□□□□ 0.06
LIMS3-203ENST00000480744 COL27A1Q8IZC6 1860 aaPredicted RBP15.4■□□□□ 0.06
LIMS3-203ENST00000480744 LRRC53A6NM62 1247 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 J3KR12 359 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 DAPK3O43293 454 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 USP12O75317 370 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 MPOP05164 745 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 EIF4A3P38919 411 aaKnown RBP15.4■□□□□ 0.06
LIMS3-203ENST00000480744 ADKP55263 362 aaKnown RBP15.4■□□□□ 0.06
LIMS3-203ENST00000480744 YPEL5P62699 121 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 GABREP78334 506 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 MAMLD1Q13495 774 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 ACAP1Q15027 740 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms