RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CES2O00748 559 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 PPP1R12AO14974 1030 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 MID1O15344 667 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 ZBTB24O43167 697 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 LEFTY1O75610 366 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 IL1BP01584 269 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 MSNP26038 577 aaKnown RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 DRD3P35462 400 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 KCNJ1P48048 391 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 CSNK1DP48730 415 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 SCNN1BP51168 640 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 TPMTP51580 245 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 GDF10P55107 478 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 SNRPD1P62314 119 aaKnown RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 DSC2Q02487 901 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 CST6Q15828 149 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 CCNG2Q16589 344 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 MAP7D1Q3KQU3 841 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 TEX44Q53QW1 395 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 PLA2G2CQ5R387 149 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 TIGD7Q6NT04 549 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 DARS2Q6PI48 645 aaKnown RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 NCEH1Q6PIU2 408 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 PRUNE1Q86TP1 453 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 PRPF39Q86UA1 669 aaKnown RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 CAMK1DQ8IU85 385 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 ZNF567Q8N184 647 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 RYBPQ8N488 228 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 TMIEQ8NEW7 156 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 PIP4K2CQ8TBX8 421 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 ACTRT1Q8TDG2 376 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 HTR3CQ8WXA8 447 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 OR8D1Q8WZ84 308 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 ARRDC3Q96B67 414 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 SIPA1Q96FS4 1042 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 TEKT5Q96M29 485 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 C16orf45Q96MC5 204 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 AGAP3Q96P47 875 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 CINPQ9BW66 212 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 AP1M1Q9BXS5 423 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 SMOC1Q9H4F8 434 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 SEPT10Q9P0V9 454 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 IL36AQ9UHA7 158 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 MBD1Q9UIS9 605 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-212ENST00000480461 WASF3Q9UPY6 502 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 SAR1BQ9Y6B6 198 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 AKAP13Q12802 2813 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 CKAP5Q14008 2032 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 TRAFD1O14545 582 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-212ENST00000480461 ALOX15BO15296 676 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 PIGNO95427 931 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 TCP1P17987 556 aaKnown RBP12.37□□□□□ -0.43
TRA2B-212ENST00000480461 ITIH2P19823 946 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 CASQ1P31415 396 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 PSMD8P48556 350 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 PTPRRQ15256 657 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 ZNF776Q68DI1 518 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-212ENST00000480461 ALG1LQ6GMV1 187 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 TTC27Q6P3X3 843 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 KIAA1324Q6UXG2 1013 aaKnown RBP12.37□□□□□ -0.43
TRA2B-212ENST00000480461 ZSWIM9Q86XI8 627 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 PGBD3Q8N328 593 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 FAM71DQ8N9W8 422 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 GLIS1Q8NBF1 620 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 GRIN3AQ8TCU5 1115 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 GAB3Q8WWW8 586 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-212ENST00000480461 TADA1Q96BN2 335 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 GDAP1L1Q96MZ0 367 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 NUDCD1Q96RS6 583 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 GORASP1Q9BQQ3 440 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 TMEM121Q9BTD3 319 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 CPEB1Q9BZB8 566 aaKnown RBP12.37□□□□□ -0.43
TRA2B-212ENST00000480461 NEUROG2Q9H2A3 272 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 PABPC3Q9H361 631 aaKnown RBP12.37□□□□□ -0.43
TRA2B-212ENST00000480461 ZDHHC6Q9H6R6 413 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 USP36Q9P275 1121 aaKnown RBP12.37□□□□□ -0.43
TRA2B-212ENST00000480461 PCDHGC4Q9Y5F7 938 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 SPAG17Q6Q759 2223 aa12.37□□□□□ -0.43
TRA2B-212ENST00000480461 SMG1Q96Q15 3661 aaKnown RBP12.36□□□□□ -0.43
TRA2B-212ENST00000480461 CCDC163A0A0D9SF12 145 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 TMEM8BA6NDV4 472 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 GIPC1O14908 333 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 KCNN4O15554 427 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 IGSF6O95976 241 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 UGT2B4P06133 528 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 ETS1P14921 441 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 TIMP2P16035 220 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 SPINK2P20155 84 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 DEKP35659 375 aaKnown RBP12.36□□□□□ -0.43
TRA2B-212ENST00000480461 P2RY2P41231 377 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 RECQLP46063 649 aaPredicted RBP12.36□□□□□ -0.43
TRA2B-212ENST00000480461 NOVA1P51513 510 aaKnown RBP12.36□□□□□ -0.43
TRA2B-212ENST00000480461 TAS2R38P59533 333 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 SKOR1P84550 965 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 CNTN1Q12860 1018 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 FOXC1Q12948 553 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms