RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 TMCO3Q6UWJ1 677 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 KYAT3Q6YP21 454 aaKnown RBP15.52■□□□□ 0.08
CDK9-203ENST00000480353 GCNT7Q6ZNI0 430 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 ARFGAP1Q8N6T3 406 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 ANP32EQ9BTT0 268 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 WRAP53Q9BUR4 548 aaKnown RBP15.52■□□□□ 0.08
CDK9-203ENST00000480353 CPEB1Q9BZB8 566 aaKnown RBP15.52■□□□□ 0.08
CDK9-203ENST00000480353 SUV39H2Q9H5I1 410 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 ATP13A3Q9H7F0 1226 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 EVA1BQ9NVM1 165 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 CWC15Q9P013 229 aaKnown RBP15.52■□□□□ 0.08
CDK9-203ENST00000480353 LHX3Q9UBR4 397 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 ZMIZ1Q9ULJ6 1067 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 MFHAS1Q9Y4C4 1052 aa15.52■□□□□ 0.08
CDK9-203ENST00000480353 MAP1BP46821 2468 aaKnown RBP15.52■□□□□ 0.07
CDK9-203ENST00000480353 A0A087X0T9 212 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 INSIG1O15503 277 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 FFAR2O15552 330 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 MMP20O60882 483 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 FAM228BP0C875 321 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 SERPINA4P29622 427 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 SERPINB6P35237 376 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 GJC1P36383 396 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 HCAR3P49019 387 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 RENBPP51606 427 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 HNRNPKP61978 463 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDK9-203ENST00000480353 IL10RBQ08334 325 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 PDE1CQ14123 709 aaPredicted RBP15.51■□□□□ 0.07
CDK9-203ENST00000480353 PTK2BQ14289 1009 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 ZNF235Q14590 738 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 RFTN1Q14699 578 aaPredicted RBP15.51■□□□□ 0.07
CDK9-203ENST00000480353 DHRS13Q6UX07 377 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 ABI3BPQ7Z7G0 1075 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 DENND6BQ8NEG7 585 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 CTNNBL1Q8WYA6 563 aaPredicted RBP15.51■□□□□ 0.07
CDK9-203ENST00000480353 BTBD6Q96KE9 485 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 TUBGCP5Q96RT8 1024 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 TOR4AQ9NXH8 423 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 CTTNBP2NLQ9P2B4 639 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 DKK3Q9UBP4 350 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 GGT7Q9UJ14 662 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 CHD8Q9HCK8 2581 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 SHROOM3Q8TF72 1996 aa15.51■□□□□ 0.07
CDK9-203ENST00000480353 FAM221BA6H8Z2 402 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 C1SP09871 688 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 CKMT2P17540 419 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 DGKAP23743 735 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 BCL2L1Q07817 233 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 DNAJC3Q13217 504 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 FGL2Q14314 439 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 DPYSL2Q16555 572 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 SPECC1LQ69YQ0 1117 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 BRAT1Q6PJG6 821 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 CCNI2Q6ZMN8 369 aaPredicted RBP15.5■□□□□ 0.07
CDK9-203ENST00000480353 TMPRSS7Q7RTY8 843 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 SRLQ86TD4 932 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 PARGQ86W56 976 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 ATPAF2Q8N5M1 289 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 KDF1Q8NAX2 398 aaPredicted RBP15.5■□□□□ 0.07
CDK9-203ENST00000480353 ZNF564Q8TBZ8 553 aaPredicted RBP15.5■□□□□ 0.07
CDK9-203ENST00000480353 HCAR2Q8TDS4 363 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 IFT43Q96FT9 208 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 ZNF641Q96N77 438 aaPredicted RBP15.5■□□□□ 0.07
CDK9-203ENST00000480353 LENG8Q96PV6 779 aaPredicted RBP15.5■□□□□ 0.07
CDK9-203ENST00000480353 C1QTNF2Q9BXJ5 285 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 PDFQ9HBH1 243 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 SEPT3Q9UH03 358 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 PCDHGA1Q9Y5H4 931 aa15.5■□□□□ 0.07
CDK9-203ENST00000480353 POM121BA6NF01 834 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 RAD51BO15315 384 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 AKR1B10O60218 316 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 LZTS3O60299 673 aaPredicted RBP15.49■□□□□ 0.07
CDK9-203ENST00000480353 CYP1A2P05177 515 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 H2AFZP0C0S5 128 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 RARAP10276 462 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 JUPP14923 745 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 TIMP2P16035 220 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 AMPD1P23109 780 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 NFKBIAP25963 317 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 EIF4A3P38919 411 aaKnown RBP15.49■□□□□ 0.07
CDK9-203ENST00000480353 SCNN1BP51168 640 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 CDH6P55285 790 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 POLR2LP62875 67 aaKnown RBP15.49■□□□□ 0.07
CDK9-203ENST00000480353 DPYSQ14117 519 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 LBRQ14739 615 aaKnown RBP15.49■□□□□ 0.07
CDK9-203ENST00000480353 ZNF542PQ5EBM4 170 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 TMCO4Q5TGY1 634 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 H2AFVQ71UI9 128 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 NIPA2Q8N8Q9 360 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 TSEN2Q8NCE0 465 aaKnown RBP15.49■□□□□ 0.07
CDK9-203ENST00000480353 RNF214Q8ND24 703 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 OR8K1Q8NGG5 319 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 TEKT4Q8WW24 435 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 ASB12Q8WXK4 309 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 BMFQ96LC9 184 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 CCDC86Q9H6F5 360 aaKnown RBP15.49■□□□□ 0.07
CDK9-203ENST00000480353 LCMT1Q9UIC8 334 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 PLXNB3Q9ULL4 1909 aa15.49■□□□□ 0.07
CDK9-203ENST00000480353 CACNA1BQ00975 2339 aa15.48■□□□□ 0.07
CDK9-203ENST00000480353 AREL1O15033 823 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms