RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TMPRSS7Q7RTY8 843 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 TFAP2DQ7Z6R9 452 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 ZSCAN30Q86W11 494 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 RGL4Q8IZJ4 473 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 CFAP52Q8N1V2 620 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 CARNMT1Q8N4J0 409 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 SLC35B2Q8TB61 432 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 FRS2Q8WU20 508 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 ZCCHC14Q8WYQ9 949 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 TRIM44Q96DX7 344 aaPredicted RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 CCDC114Q96M63 670 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 ZNF830Q96NB3 372 aaPredicted RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 PPP1R2P1Q96PQ5 205 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 IL12RB2Q99665 862 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 TUBB2BQ9BVA1 445 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 RSPH9Q9H1X1 276 aaPredicted RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 C6orf106Q9H6K1 298 aaPredicted RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 ATP13A1Q9HD20 1204 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 SUN2Q9UH99 717 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 EIF2B4Q9UI10 523 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 SLC25A13Q9UJS0 675 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 VPS28Q9UK41 221 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 TPX2Q9ULW0 747 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 ERVW-1Q9UQF0 538 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 FNDC3AQ9Y2H6 1198 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 GPSM3Q9Y4H4 160 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 HYOU1Q9Y4L1 999 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 GCN1Q92616 2671 aaKnown RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 A0A0D9SEW6 157 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 EDDM13A0A1B0GTR0 161 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 A0A1W2PQ67 120 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 USP27XA6NNY8 438 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 MATN3O15232 486 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 DAPK3O43293 454 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 MFSD11O43934 449 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 PCDHGA12O60330 932 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 SYNCRIPO60506 623 aaKnown RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 ZNF821O75541 412 aaPredicted RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 IGHV4-34P06331 123 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 SRCP12931 536 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 HLA-EP13747 358 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 CR2P20023 1033 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 AMPD1P23109 780 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 MZF1P28698 734 aaPredicted RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 GGCXP38435 758 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 NNMTP40261 264 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 CSNK1EP49674 416 aaKnown RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 RENBPP51606 427 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 SUOXP51687 545 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 ODF2Q5BJF6 829 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 SEL1L2Q5TEA6 688 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 ARMC3Q5W041 872 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 RNF219Q5W0B1 726 aaPredicted RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 ZNF572Q7Z3I7 529 aaPredicted RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 CIR1Q86X95 450 aaPredicted RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 SLC13A5Q86YT5 568 aaPredicted RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 RAVER1Q8IY67 606 aaKnown RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 ZCCHC9Q8N567 271 aaKnown RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 ATPAF2Q8N5M1 289 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 PNPLA1Q8N8W4 532 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 SLCO2A1Q92959 643 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 VOPP1Q96AW1 172 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 BIRC7Q96CA5 298 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 HAUS1Q96CS2 278 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 HMCESQ96FZ2 354 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 QKIQ96PU8 341 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDX56-211ENST00000479602 TUBGCP5Q96RT8 1024 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 C19orf43Q9BQ61 176 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 MGME1Q9BQP7 344 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 MAGEB5Q9BZ81 275 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 CPEB1Q9BZB8 566 aaKnown RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 MUC3BQ9H195 1237 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 GAREM1Q9H706 876 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 EBF2Q9HAK2 575 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 TM7SF3Q9NS93 570 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 ETNK2Q9NVF9 386 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 IPO11Q9UI26 975 aaKnown RBP9.04□□□□□ -0.96
DDX56-211ENST00000479602 PLA2G4CQ9UP65 541 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 SNX10Q9Y5X0 201 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 PTPRQQ9UMZ3 2332 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 BPTFQ12830 3046 aa9.04□□□□□ -0.96
DDX56-211ENST00000479602 A0A1B0GVT2 93 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 TSPAN11A1L157 253 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 TMEM110-MUSTN1A8MSY1 372 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 MCF2LO15068 1137 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 CST8O60676 142 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 CD27P26842 260 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 CTSKP43235 329 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 GRIA4P48058 902 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 PAPOLAP51003 745 aaKnown RBP9.03□□□□□ -0.96
DDX56-211ENST00000479602 AFF3P51826 1226 aaKnown RBP9.03□□□□□ -0.96
DDX56-211ENST00000479602 ST8SIA6P61647 398 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 AP1S1P61966 158 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 SFSWAPQ12872 951 aaKnown RBP9.03□□□□□ -0.96
DDX56-211ENST00000479602 MMRN1Q13201 1228 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 SIX1Q15475 284 aaPredicted RBP9.03□□□□□ -0.96
DDX56-211ENST00000479602 OASLQ15646 514 aaKnown RBP9.03□□□□□ -0.96
DDX56-211ENST00000479602 CCNG2Q16589 344 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 ZNF569Q5MCW4 686 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms