RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ZSWIM9Q86XI8 627 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 ZNF653Q96CK0 615 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 C1QTNF2Q9BXJ5 285 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 CATSPERBQ9H7T0 1116 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 CNOT8Q9UFF9 292 aaKnown RBP17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 HS3ST3A1Q9Y663 406 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 U3KQA8 63 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 K7ESM1 405 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 DFFAO00273 331 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 AREL1O15033 823 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 FTLP02792 175 aaPredicted RBP17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 CELA2BP08218 269 aaPredicted RBP17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 ACP1P24666 158 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 ITPKBP27987 946 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 ZNF165P49910 485 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 PAPOLAP51003 745 aaKnown RBP17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 ZNF211Q13398 564 aaPredicted RBP17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 SMTNL2Q2TAL5 461 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 PLEKHA7Q6IQ23 1121 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 CYP4V2Q6ZWL3 525 aaPredicted RBP17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 NPWQ8N729 165 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 ZNF548Q8NEK5 533 aaPredicted RBP17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 LMX1AQ8TE12 382 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 CXorf40AQ8TE69 158 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 BTBD6Q96KE9 485 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 NAT10Q9H0A0 1025 aaKnown RBP17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 LRRC19Q9H756 370 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 PDFQ9HBH1 243 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 GPR27Q9NS67 375 aa17.59■□□□□ 0.41
ECHDC1-216ENST00000479525 CACNA1GO43497 2377 aa17.58■□□□□ 0.41
ECHDC1-216ENST00000479525 SPTY2D1-AS1A0A0U1RR47 76 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 WASH4PA8MWX3 477 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 TSPAN6O43657 245 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 BUB1BO60566 1050 aaPredicted RBP17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 JUNDP17535 347 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 MIPP30301 263 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 KLHL30Q0D2K2 578 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 IQCB1Q15051 598 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 CDKN3Q16667 212 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 HS1BP3Q53T59 392 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 PARGQ86W56 976 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 CAMK1DQ8IU85 385 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 PLPP6Q8IY26 295 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 UMODL1-AS1Q8N2C9 162 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 TSEN2Q8NCE0 465 aaKnown RBP17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 NSMCE3Q96MG7 304 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 FUCA2Q9BTY2 467 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 OSBPL1AQ9BXW6 950 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 PARVAQ9NVD7 372 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 CLCA2Q9UQC9 943 aa17.58■□□□□ 0.4
ECHDC1-216ENST00000479525 A0A1B0GTH6 734 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 SYCE3A1L190 88 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 ZSCAN5CA6NGD5 496 aaPredicted RBP17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 SMTNL1A8MU46 457 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 A8MX80 341 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 DAPK3O43293 454 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 GCATO75600 419 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 TM7SF2O76062 418 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 MT-CO3P00414 261 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 SERPINC1P01008 464 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 C1SP09871 688 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 CCDC172P0C7W6 258 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 ERCC2P18074 760 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 XPAP23025 273 aaPredicted RBP17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 RABIFP47224 123 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 YBEYP58557 167 aaPredicted RBP17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 PFN3P60673 137 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 RAD51Q06609 339 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 IRF4Q15306 451 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 PARP15Q460N3 678 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 FILIP1LQ4L180 1135 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 ERMARDQ5T6L9 678 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 PDZD3Q86UT5 571 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 LUZP1Q86V48 1076 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 ARHGAP12Q8IWW6 846 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 TP53I13Q8NBR0 393 aaPredicted RBP17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 RAB7BQ96AH8 199 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 CENPTQ96BT3 561 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 BPIFA3Q9BQP9 254 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 PCDH12Q9NPG4 1184 aa17.57■□□□□ 0.4
ECHDC1-216ENST00000479525 CPED1A4D0V7 1026 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 TMEM191CA6NGB0 347 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 MUSKO15146 869 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 FGF10O15520 208 aaPredicted RBP17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 PRAMEF11O60813 436 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 CSF2P04141 144 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 NME1P15531 152 aaKnown RBP17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 IL1R2P27930 398 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 HNRNPKP61978 463 aaKnown RBP eCLIP17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 TDRD12Q587J7 1177 aaKnown RBP17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 KCTD16Q68DU8 428 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 TXNRD3NBQ6F5E7 133 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 GUSBP11Q6P575 273 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 RFX8Q6ZV50 586 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 IFI44Q8TCB0 444 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 CPLX3Q8WVH0 158 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 NXPE2Q96DL1 559 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 LENG8Q96PV6 779 aaPredicted RBP17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 ZWILCHQ9H900 591 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 CBX8Q9HC52 389 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms