RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 KRT10P13645 584 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 SUOXP51687 545 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 TAS2R38P59533 333 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 BCL2L1Q07817 233 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 PPIDQ08752 370 aaKnown RBP20.72■□□□□ 0.91
VARS-224ENST00000479051 SLC10A2Q12908 348 aaPredicted RBP20.72■□□□□ 0.91
VARS-224ENST00000479051 TEAD4Q15561 434 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 ZNF662Q6ZS27 426 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 ZSCAN30Q86W11 494 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 TEX26Q8N6G2 289 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 MAML1Q92585 1016 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 ALS2CR12Q96Q35 445 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 NUDCD1Q96RS6 583 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.72■□□□□ 0.91
VARS-224ENST00000479051 USP34Q70CQ2 3546 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 PATE3B3GLJ2 98 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 RNGTTO60942 597 aaKnown RBP20.71■□□□□ 0.91
VARS-224ENST00000479051 PIGNO95427 931 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 SYPP08247 313 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 CCNB1P14635 433 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 RGRP47804 291 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 ITKQ08881 620 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 SETMARQ53H47 684 aaPredicted RBP20.71■□□□□ 0.91
VARS-224ENST00000479051 CCDC181Q5TID7 509 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 TCEAL6Q6IPX3 200 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 KIAA1161Q6NSJ0 714 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 BRAT1Q6PJG6 821 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 TTC7BQ86TV6 843 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 P3H4Q92791 437 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 TCEAL3Q969E4 200 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 FEM1CQ96JP0 617 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 POLR1EQ9GZS1 481 aaKnown RBP20.71■□□□□ 0.91
VARS-224ENST00000479051 NT5MQ9NPB1 228 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 DMTF1Q9Y222 760 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 EFR3BQ9Y2G0 817 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 FADS3Q9Y5Q0 445 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 SHROOM3Q8TF72 1996 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 GON4LQ3T8J9 2241 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 FRYLO94915 3013 aa20.71■□□□□ 0.91
VARS-224ENST00000479051 GVINP1Q7Z2Y8 2422 aa20.7■□□□□ 0.91
VARS-224ENST00000479051 A0A1W2PQ67 120 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 MUSKO15146 869 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 LATO43561 262 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 TSPAN6O43657 245 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 FTCDO95954 541 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 CES1P23141 567 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 AFF3P51826 1226 aaKnown RBP20.7■□□□□ 0.9
VARS-224ENST00000479051 ATXN3P54252 364 aaPredicted RBP20.7■□□□□ 0.9
VARS-224ENST00000479051 PPP2CBP62714 309 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 PPP2CAP67775 309 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 AP1B1Q10567 949 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 LLGL1Q15334 1064 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 NPNTQ6UXI9 565 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 ADAT2Q7Z6V5 191 aaKnown RBP20.7■□□□□ 0.9
VARS-224ENST00000479051 HORMAD1Q86X24 394 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 SKA1Q96BD8 255 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 OLFM3Q96PB7 478 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 LGMNQ99538 433 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 LZTFL1Q9NQ48 299 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 RBM22Q9NW64 420 aaKnown RBP eCLIP20.7■□□□□ 0.95e-6■■■■■ 31.7
VARS-224ENST00000479051 CAPN6Q9Y6Q1 641 aa20.7■□□□□ 0.9
VARS-224ENST00000479051 A0A1W2PQU0 124 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 TSPAN11A1L157 253 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 SOCS5O75159 536 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 CR2P20023 1033 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 SDHBP21912 280 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 NFKBIAP25963 317 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 MAT2AP31153 395 aaKnown RBP20.69■□□□□ 0.9
VARS-224ENST00000479051 PTPN7P35236 360 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 PEX5P50542 639 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 MAXP61244 160 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 POLR2LP62875 67 aaKnown RBP20.69■□□□□ 0.9
VARS-224ENST00000479051 RPS21P63220 83 aaKnown RBP20.69■□□□□ 0.9
VARS-224ENST00000479051 RACK1P63244 317 aaKnown RBP20.69■□□□□ 0.9
VARS-224ENST00000479051 IRX4P78413 519 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 ELP6Q0PNE2 266 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 GSE1Q14687 1217 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 SLC45A4Q5BKX6 768 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 CAMK1DQ8IU85 385 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 PGBD5Q8N414 524 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 EDEM2Q9BV94 578 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 HEMGNQ9BXL5 484 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 OSBPL8Q9BZF1 889 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 ZDHHC5Q9C0B5 715 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 CAPN10Q9HC96 672 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 TM9SF3Q9HD45 589 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 PPP2R2CQ9Y2T4 447 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 TTLL3Q9Y4R7 772 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 ZNF292O60281 2723 aa20.69■□□□□ 0.9
VARS-224ENST00000479051 WDR87Q6ZQQ6 2873 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 LNP1A1A4G5 178 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 UPK3BL1B0FP48 263 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 C10orf142B7Z368 130 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 UPK3BL2E5RIL1 263 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 TJP3O95049 919 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 ABL2P42684 1182 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 IFI35P80217 286 aaPredicted RBP20.68■□□□□ 0.9
VARS-224ENST00000479051 ERAP2Q6P179 960 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 BBS12Q6ZW61 710 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 C1orf216Q8TAB5 229 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms