RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 KCND2Q9NZV8 630 aa4.12□□□□□ -1.75
SMARCA1-204ENST00000478420 MPP6Q9NZW5 540 aa4.12□□□□□ -1.75
SMARCA1-204ENST00000478420 FZD10Q9ULW2 581 aa4.12□□□□□ -1.75
SMARCA1-204ENST00000478420 RAI2Q9Y5P3 530 aa4.12□□□□□ -1.75
SMARCA1-204ENST00000478420 INSL5Q9Y5Q6 135 aa4.12□□□□□ -1.75
SMARCA1-204ENST00000478420 CHL1O00533 1208 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 RGS14O43566 566 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 ITM2AO43736 263 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 ATP2C2O75185 946 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 TACC1O75410 805 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 F9P00740 461 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 LCATP04180 440 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 TFPIP10646 304 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 MYF6P23409 242 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 ELF1P32519 619 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 RYKP34925 604 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 KRT9P35527 623 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 THPOP40225 353 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 RFX5P48382 616 aaPredicted RBP4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 CLCN5P51795 746 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 PMS2P54278 862 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 PRICKLE4Q2TBC4 344 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 ZNF284Q2VY69 593 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 DCAF6Q58WW2 860 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 FSCBQ5H9T9 825 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 CES5AQ6NT32 575 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 C9orf47Q6ZRZ4 202 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 KIAA2013Q8IYS2 634 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 PELI3Q8N2H9 469 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 PCYOX1LQ8NBM8 494 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 NFKBIDQ8NI38 313 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 LBHD1Q9BQE6 289 aaPredicted RBP4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 UNC45AQ9H3U1 944 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 EBF3Q9H4W6 596 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 C20orf141Q9NUB4 165 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 ANKRD10Q9NXR5 420 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 IL36RNQ9UBH0 155 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 NDRG3Q9UGV2 375 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 SCINQ9Y6U3 715 aa4.11□□□□□ -1.75
SMARCA1-204ENST00000478420 A0A1B0GVT2 93 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 KDM4EB2RXH2 506 aaPredicted RBP4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 INAFM1C9JVW0 142 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 CCER2I3L3R5 266 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 ASAP2O43150 1006 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 ZNF500O60304 480 aaPredicted RBP4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 CBSLP0DN79 551 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 IRF1P10914 325 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 ATP1A3P13637 1013 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 NAGAP17050 411 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 SRD5A1P18405 259 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 PTMSP20962 102 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 HOXD3P31249 432 aaPredicted RBP4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 ARRB2P32121 409 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 ABCD1P33897 745 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 MAN1A1P33908 653 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 CBSP35520 551 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 CASP6P55212 293 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 LINC00205P59089 165 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 NEXNQ0ZGT2 675 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 PTP4A2Q12974 167 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 GPS2Q13227 327 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 HIST2H2ACQ16777 129 aaPredicted RBP4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 SLC9B1Q4ZJI4 515 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 CPLX2Q6PUV4 134 aaKnown RBP4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 H1FNTQ75WM6 255 aaPredicted RBP4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 TRILQ7L0X0 811 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 MIGA1Q8NAN2 632 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 GJC3Q8NFK1 279 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 OIT3Q8WWZ8 545 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 KLHL29Q96CT2 875 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 ZC3HAV1LQ96H79 300 aaKnown RBP4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 KLHL15Q96M94 604 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 HEMGNQ9BXL5 484 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 NUF2Q9BZD4 464 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 DCLK3Q9C098 648 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 SLC25A18Q9H1K4 315 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 WDR26Q9H7D7 661 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 CTNNAL1Q9UBT7 734 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 HSPB7Q9UBY9 170 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 SARDHQ9UL12 918 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 CAMK2AQ9UQM7 478 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 CARD8Q9Y2G2 431 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 PTGDR2Q9Y5Y4 395 aa4.1□□□□□ -1.75
SMARCA1-204ENST00000478420 TTC36A6NLP5 189 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 HSPB2A8KAH6 182 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 KLRF2D3W0D1 207 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 J3KRW8 73 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 INSIG1O15503 277 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 MTA2O94776 668 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 NTN1O95631 604 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 HEXAP06865 529 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 SNHG28P0DPA3 235 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 HDAC4P56524 1084 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 CLDN2P57739 230 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 ST3GAL1Q11201 340 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 ITGADQ13349 1161 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 SIM2Q14190 667 aaPredicted RBP4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 ARHGEF6Q15052 776 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 HSPB2Q16082 182 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms