RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 PPM1HQ9ULR3 514 aa11.6□□□□□ -0.55
CBWD3-206ENST00000478048 ZNF148Q9UQR1 794 aa11.6□□□□□ -0.55
CBWD3-206ENST00000478048 WDFY4Q6ZS81 3184 aa11.6□□□□□ -0.55
CBWD3-206ENST00000478048 EML5Q05BV3 1969 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 MID1O15344 667 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 MTSS1O43312 755 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 NEBLO76041 1014 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 PAPSS2O95340 614 aaPredicted RBP11.59□□□□□ -0.55
CBWD3-206ENST00000478048 POP4O95707 220 aaKnown RBP11.59□□□□□ -0.55
CBWD3-206ENST00000478048 IL1BP01584 269 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 TUBB4AP04350 444 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 HSPA9P38646 679 aaKnown RBP11.59□□□□□ -0.55
CBWD3-206ENST00000478048 PSMD8P48556 350 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 RPS14P62263 151 aaKnown RBP11.59□□□□□ -0.55
CBWD3-206ENST00000478048 CYP1B1Q16678 543 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 ANKRD20A2Q5SQ80 823 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 ANKRD20A1Q5TYW2 823 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 ANKRD20A3Q5VUR7 823 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 DRICH1Q6PGQ1 229 aaPredicted RBP11.59□□□□□ -0.55
CBWD3-206ENST00000478048 NCEH1Q6PIU2 408 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 PID1Q7Z2X4 250 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 PGBD3Q8N328 593 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 ARRDC2Q8TBH0 407 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 CCDC110Q8TBZ0 833 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 MAGOHBQ96A72 148 aaKnown RBP11.59□□□□□ -0.55
CBWD3-206ENST00000478048 CCDC114Q96M63 670 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 NUDCD1Q96RS6 583 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 TPSD1Q9BZJ3 242 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 POLR1EQ9GZS1 481 aaKnown RBP11.59□□□□□ -0.55
CBWD3-206ENST00000478048 KLHL8Q9P2G9 620 aaPredicted RBP11.59□□□□□ -0.55
CBWD3-206ENST00000478048 AMACRQ9UHK6 382 aa11.59□□□□□ -0.55
CBWD3-206ENST00000478048 CACNA1HO95180 2353 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 PLK4O00444 970 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 ALOX15BO15296 676 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 ZNF500O60304 480 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 APBB3O95704 486 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 UGT2B4P06133 528 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 ITGAVP06756 1048 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 MMP2P08253 660 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 ZSCAN5DPP0CG00 497 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 TDGF1P13385 188 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 ETS1P14921 441 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 NFKB1P19838 968 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 PAFAH1B1P43034 410 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 CSNK1DP48730 415 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 CSTF1Q05048 431 aaKnown RBP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 CST6Q15828 149 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 ZNF776Q68DI1 518 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 ALG1LQ6GMV1 187 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 KIAA1324Q6UXG2 1013 aaKnown RBP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 RASSF3Q86WH2 238 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 CAMK1DQ8IU85 385 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 CAMKK1Q8N5S9 505 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 C12orf50Q8NA57 414 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 SPATA22Q8NHS9 363 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 KIF18AQ8NI77 898 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 PRCCQ92733 491 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 SIPA1Q96FS4 1042 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 VAT1Q99536 393 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 DDX47Q9H0S4 455 aaKnown RBP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 FBRSQ9HAH7 460 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 GLOD4Q9HC38 313 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 HOMER3Q9NSC5 361 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 BCCIPQ9P287 314 aaKnown RBP eCLIP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 RNF14Q9UBS8 474 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 EBF1Q9UH73 591 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 CDC23Q9UJX2 597 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 DRG1Q9Y295 367 aaKnown RBP11.58□□□□□ -0.56
CBWD3-206ENST00000478048 PCDHGC4Q9Y5F7 938 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 USP34Q70CQ2 3546 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 SDK1Q7Z5N4 2213 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 GON4LQ3T8J9 2241 aa11.58□□□□□ -0.56
CBWD3-206ENST00000478048 CFAP69A5D8W1 941 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 C5orf60A6NFR6 353 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 KPNA3O00505 521 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-206ENST00000478048 RNASEH1O60930 286 aaKnown RBP11.57□□□□□ -0.56
CBWD3-206ENST00000478048 PHF2O75151 1096 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 MT-CYBP00156 380 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-206ENST00000478048 IFNB1P01574 187 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 PRNPP04156 253 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 SLC8A1P32418 973 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 COILP38432 576 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-206ENST00000478048 CD86P42081 329 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 RAD51Q06609 339 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 PRPF39Q86UA1 669 aaKnown RBP11.57□□□□□ -0.56
CBWD3-206ENST00000478048 TAB3Q8N5C8 712 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-206ENST00000478048 AADATQ8N5Z0 425 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 TMIEQ8NEW7 156 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 ARRDC3Q96B67 414 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 RTP4Q96DX8 246 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 SPATA13Q96N96 652 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 KLHL32Q96NJ5 620 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 RBM15Q96T37 977 aaKnown RBP eCLIP11.57□□□□□ -0.56
CBWD3-206ENST00000478048 CPEB1Q9BZB8 566 aaKnown RBP11.57□□□□□ -0.56
CBWD3-206ENST00000478048 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 SERGEFQ9UGK8 458 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 ABCA7Q8IZY2 2146 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 GOLGA6L10A0A0M3HER8 536 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 A0A1W2PP55 124 aa11.57□□□□□ -0.56
CBWD3-206ENST00000478048 GCATO75600 419 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms