RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 NANOGP1Q8N7R0 232 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 C16orf52Q8NHV5 167 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 DNAAF4Q8WXU2 420 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 TRMT61AQ96FX7 289 aaKnown RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 FAR2Q96K12 515 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 ZNF48Q96MX3 618 aaPredicted RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 TGS1Q96RS0 853 aaKnown RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 TMEM79Q9BSE2 394 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 MOV10L1Q9BXT6 1211 aaKnown RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 SPATC1LQ9H0A9 340 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 DDX4Q9NQI0 724 aaKnown RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 MAGED2Q9UNF1 606 aaPredicted RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 SYNRGQ9UMZ2 1314 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 FRMPD3Q5JV73 1810 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 MYH3P11055 1940 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 DLG5Q8TDM6 1919 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 LOC105369274A0A096LPK9 316 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 LOC102723532A0A0G2JNH3 316 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 GOLGA6L3A6NEY3 463 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 LOC285556D6RIA3 1793 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 FFAR2O15552 330 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 CNOT3O75175 753 aaKnown RBP5.1□□□□□ -1.59
VPS50-214ENST00000477935 RPP40O75818 363 aaKnown RBP5.1□□□□□ -1.59
VPS50-214ENST00000477935 SLC25A27O95847 323 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 LDHCP07864 332 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 CD63P08962 238 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 BTDP43251 543 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 CKAP5Q14008 2032 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 RBMS2Q15434 407 aaKnown RBP5.1□□□□□ -1.59
VPS50-214ENST00000477935 RFX7Q2KHR2 1363 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 LRCH2Q5VUJ6 765 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 RINT1Q6NUQ1 792 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 ATF7IPQ6VMQ6 1270 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 DZIP1Q86YF9 867 aaKnown RBP5.1□□□□□ -1.59
VPS50-214ENST00000477935 GATAD2AQ86YP4 633 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 UEVLDQ8IX04 471 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 NRSN1Q8IZ57 195 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 OR4N4Q8N0Y3 316 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 ZNF527Q8NB42 609 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 WDR60Q8WVS4 1066 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 MRPL38Q96DV4 380 aaKnown RBP5.1□□□□□ -1.59
VPS50-214ENST00000477935 RAD9AQ99638 391 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 SCNM1Q9BWG6 230 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 PUS3Q9BZE2 481 aaKnown RBP5.1□□□□□ -1.59
VPS50-214ENST00000477935 WDR12Q9GZL7 423 aaKnown RBP5.1□□□□□ -1.59
VPS50-214ENST00000477935 ZMYM2Q9UBW7 1377 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 B3GNT3Q9Y2A9 372 aa5.1□□□□□ -1.59
VPS50-214ENST00000477935 PHIPQ8WWQ0 1821 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 UNC79Q9P2D8 2635 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 A0A087WV62 115 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 GRM8O00222 908 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 DNPH1O43598 174 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 USP12O75317 370 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 ENO1P06733 434 aaKnown RBP5.09□□□□□ -1.59
VPS50-214ENST00000477935 AKT1P31749 480 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 CPA2P48052 419 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 SOX2P48431 317 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 PLCD1P51178 756 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 SLC12A2P55011 1212 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 VCPP55072 806 aaKnown RBP5.09□□□□□ -1.59
VPS50-214ENST00000477935 RHBDL3P58872 404 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 GSTO1P78417 241 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 SPARCL1Q14515 664 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 GLE1Q53GS7 698 aaKnown RBP5.09□□□□□ -1.59
VPS50-214ENST00000477935 MRPL10Q7Z7H8 261 aaKnown RBP5.09□□□□□ -1.59
VPS50-214ENST00000477935 TRABD2AQ86V40 505 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 ANKRD13BQ86YJ7 626 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 FAM71BQ8TC56 605 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 BCAS4Q8TDM0 211 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 WIPF2Q8TF74 440 aaPredicted RBP5.09□□□□□ -1.59
VPS50-214ENST00000477935 GDPD5Q8WTR4 605 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 STYXQ8WUJ0 223 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 GPR78Q96P69 363 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 FCRL4Q96PJ5 515 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 TRIM2Q9C040 744 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 UPF3AQ9H1J1 476 aaKnown RBP5.09□□□□□ -1.59
VPS50-214ENST00000477935 TP63Q9H3D4 680 aaPredicted RBP5.09□□□□□ -1.59
VPS50-214ENST00000477935 OBP2BQ9NPH6 170 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 C9orf78Q9NZ63 289 aaPredicted RBP5.09□□□□□ -1.59
VPS50-214ENST00000477935 LRCH1Q9Y2L9 728 aa5.09□□□□□ -1.59
VPS50-214ENST00000477935 DOCK1Q14185 1865 aa5.09□□□□□ -1.6
VPS50-214ENST00000477935 SPEF2Q9C093 1822 aa5.09□□□□□ -1.6
VPS50-214ENST00000477935 SETXQ7Z333 2677 aaKnown RBP5.09□□□□□ -1.6
VPS50-214ENST00000477935 A0A0G2JMZ2 1700 aa5.09□□□□□ -1.6
VPS50-214ENST00000477935 CEP250Q9BV73 2442 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 MROH7-TTC4A0A0A0MT08 1334 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 UMODL1Q5DID0 1318 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 EMSYQ7Z589 1322 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 ABHD14A-ACY1A0A1B0GW23 586 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 M0QYT0 321 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 NKX2-8O15522 239 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 MBTPS2O43462 519 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 TNFRSF6BO95407 300 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 PRF1P14222 555 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 COPB2P35606 906 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 NR4A2P43354 598 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 TNFAIP2Q03169 654 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 HNRNPA0Q13151 305 aaKnown RBP5.08□□□□□ -1.6
VPS50-214ENST00000477935 ITGA7Q13683 1181 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 BRD3Q15059 726 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms