RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZNF438Q7Z4V0 828 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 TAC4Q86UU9 113 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 VPS36Q86VN1 386 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 BMPERQ8N8U9 685 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 AGBL5Q8NDL9 886 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 CCDC112Q8NEF3 446 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 FAM46DQ8NEK8 389 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 RAB7BQ96AH8 199 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 VOPP1Q96AW1 172 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 RTP4Q96DX8 246 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 EEF2KMTQ96G04 330 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 CCDC74BQ96LY2 380 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 C7orf25Q9BPX7 421 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 UNKQ9C0B0 810 aaKnown RBP7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 INTS2Q9H0H0 1204 aaKnown RBP7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 TNKS2Q9H2K2 1166 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 OCIAD1Q9NX40 245 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 VPS51Q9UID3 782 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 ENTPD4Q9Y227 616 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 SLC5A6Q9Y289 635 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 ABCA2Q9BZC7 2435 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 TMEM110-MUSTN1A8MSY1 372 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 AREL1O15033 823 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 RFPL1O75677 317 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 ENDOD1O94919 500 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 FBXO21O94952 628 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 IGLV3-25P01717 112 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 FURINP09958 794 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 F8A1P23610 371 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 COPB1P53618 953 aaKnown RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 MCCD1P59942 119 aaPredicted RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 SRP54P61011 504 aaKnown RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 KRT83P78385 493 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 AMPD3Q01432 767 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 SQSTM1Q13501 440 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 AUHQ13825 339 aaKnown RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 NAA30Q147X3 362 aaPredicted RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 NR1D2Q14995 579 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 C5orf22Q49AR2 442 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 PRR30Q53SZ7 412 aaPredicted RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 RABGAP1LQ5R372 815 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 ANKS6Q68DC2 871 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 LCLAT1Q6UWP7 414 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 LINGO4Q6UY18 593 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 C17orf82Q86X59 251 aaPredicted RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 TP53INP2Q8IXH6 220 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 TTC13Q8NBP0 860 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 TP53I13Q8NBR0 393 aaPredicted RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 HSFY1Q96LI6 401 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 C5orf34Q96MH7 638 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 HEPHQ9BQS7 1158 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 KCTD10Q9H3F6 313 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 MLXIPLQ9NP71 852 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 ITM2BQ9Y287 266 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 MRPS18BQ9Y676 258 aaKnown RBP7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 DGKBQ9Y6T7 804 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 HIVEP3Q5T1R4 2406 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 AKAP9Q99996 3911 aa7.42□□□□□ -1.22
SPTLC1-205ENST00000477888 PVALEFA0A1B0GWK0 134 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 ARHGAP10A1A4S6 786 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 C16orf96A6NNT2 1141 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 PDXKO00764 312 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 NEMP1O14524 444 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 MAPK13O15264 365 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 CLDN11O75508 207 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 CBX6O95503 412 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TRUB2O95900 331 aaKnown RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 NR3C1P04150 777 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TRIM49P0CI25 452 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TRIM49CP0CI26 452 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 THRAP10827 490 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 VDRP11473 427 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 CD19P15391 556 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 CASP1P29466 404 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 ALDH4A1P30038 563 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 CSTF2P33240 577 aaKnown RBP eCLIP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 LEPRP48357 1165 aaKnown RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 RPL34P49207 117 aaKnown RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 PMS2P54278 862 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 RAB15P59190 212 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 PITX1P78337 314 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 DPYDQ12882 1025 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 STK4Q13043 487 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 NFATC4Q14934 902 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TESK1Q15569 626 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 CEP135Q66GS9 1140 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 SP5Q6BEB4 398 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 C22orf39Q6P5X5 142 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 ENPP7Q6UWV6 458 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 XYLT1Q86Y38 959 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 IRF2BP1Q8IU81 584 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 APLFQ8IW19 511 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 MCEMP1Q8IX19 187 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 ATP6V0D2Q8N8Y2 350 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 CCDC150Q8NCX0 1101 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 OR4D9Q8NGE8 314 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TFAP2BQ92481 460 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 RPRD1AQ96P16 312 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TEFMQ96QE5 360 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms