RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 H2AFZP0C0S5 128 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 TIMP2P16035 220 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 KYAT3Q6YP21 454 aaKnown RBP22.01■■□□□ 1.11
COL9A3-211ENST00000477612 H2AFVQ71UI9 128 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 DENND6BQ8NEG7 585 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 ZNF564Q8TBZ8 553 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-211ENST00000477612 IFT43Q96FT9 208 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 ZNF641Q96N77 438 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-211ENST00000477612 CSPG4P5Q96PW8 444 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 TUBGCP5Q96RT8 1024 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 SUV39H2Q9H5I1 410 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 PCDH18Q9HCL0 1135 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 FZD3Q9NPG1 666 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 ABHD10Q9NUJ1 306 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.01■■□□□ 1.11
COL9A3-211ENST00000477612 KLHL11Q9NVR0 708 aa22.01■■□□□ 1.11
COL9A3-211ENST00000477612 RCOR3Q9P2K3 495 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-211ENST00000477612 IGLON5A6NGN9 336 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 PALMO75781 387 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 ATXN1LP0C7T5 689 aaKnown RBP22■■□□□ 1.11
COL9A3-211ENST00000477612 AMPD1P23109 780 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 IL4RP24394 825 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 ARSEP51690 589 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 ARHGAP36Q6ZRI8 547 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 TP53INP2Q8IXH6 220 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 PNPLA1Q8N8W4 532 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 TSEN2Q8NCE0 465 aaKnown RBP22■■□□□ 1.11
COL9A3-211ENST00000477612 RNF214Q8ND24 703 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 OR13H1Q8NG92 308 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 HSPH1Q92598 858 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 GATA6Q92908 595 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 EXOC2Q96KP1 924 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 ZNF599Q96NL3 588 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 MYOCQ99972 504 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 SP110Q9HB58 689 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 ETNK2Q9NVF9 386 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 IPO11Q9UI26 975 aaKnown RBP22■■□□□ 1.11
COL9A3-211ENST00000477612 LCMT1Q9UIC8 334 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 GGT7Q9UJ14 662 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 KLK13Q9UKR3 277 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 ASPMQ8IZT6 3477 aa22■■□□□ 1.11
COL9A3-211ENST00000477612 EPG5Q9HCE0 2579 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 KMT2BQ9UMN6 2715 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-211ENST00000477612 A6NNZ2 444 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 DFFAO00273 331 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 RAD51BO15315 384 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 BUB1BO60566 1050 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-211ENST00000477612 MFAP3LO75121 409 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 RGRP47804 291 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 CLDN2P57739 230 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 SGCGQ13326 291 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 HADHQ16836 314 aaKnown RBP21.99■■□□□ 1.11
COL9A3-211ENST00000477612 TMEM52BQ4KMG9 183 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 TMCO3Q6UWJ1 677 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 SRLQ86TD4 932 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 SLC22A18ASQ8N1D0 253 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 PSKH2Q96QS6 385 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 ZNHIT6Q9NWK9 470 aaKnown RBP21.99■■□□□ 1.11
COL9A3-211ENST00000477612 ITM2BQ9Y287 266 aa21.99■■□□□ 1.11
COL9A3-211ENST00000477612 POM121BA6NF01 834 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 NEMP1O14524 444 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 PROSCO94903 275 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 PIGNO95427 931 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 PEX11BO96011 259 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 PROS1P07225 676 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 TPM1P09493 284 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 TMEM253P0C7T8 217 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 UGP2Q16851 508 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 TMCO4Q5TGY1 634 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 BRAT1Q6PJG6 821 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 SARM1Q6SZW1 724 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 UNQ6494/PRO21346Q6UXR6 183 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 Q6ZSR6 202 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 CTNNBL1Q8WYA6 563 aaPredicted RBP21.98■■□□□ 1.11
COL9A3-211ENST00000477612 CENPTQ96BT3 561 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 CHP1Q99653 195 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 PACSIN1Q9BY11 444 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 FTSJ1Q9UET6 329 aa21.98■■□□□ 1.11
COL9A3-211ENST00000477612 RABIFP47224 123 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 RENBPP51606 427 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 PFN3P60673 137 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 ELP6Q0PNE2 266 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 TBX2Q13207 712 aaPredicted RBP21.97■■□□□ 1.11
COL9A3-211ENST00000477612 TSR1Q2NL82 804 aaKnown RBP21.97■■□□□ 1.11
COL9A3-211ENST00000477612 ECHDC3Q96DC8 303 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 CINPQ9BW66 212 aaPredicted RBP21.97■■□□□ 1.11
COL9A3-211ENST00000477612 DEF6Q9H4E7 631 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 CTTNBP2NLQ9P2B4 639 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 SEPT3Q9UH03 358 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 PCDHGA1Q9Y5H4 931 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 WDFY3Q8IZQ1 3526 aa21.97■■□□□ 1.11
COL9A3-211ENST00000477612 SPTY2D1-AS1A0A0U1RR47 76 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 C1QTNF9BB2RNN3 333 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 FPGTO14772 594 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 MUSKO15146 869 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 AKR1B10O60218 316 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 MAFKO60675 156 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 TM7SF2O76062 418 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 LDOC1O95751 146 aaPredicted RBP21.96■■□□□ 1.11
COL9A3-211ENST00000477612 C1QTNF9P0C862 333 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms