RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ATP13A3Q9H7F0 1226 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 GLOD4Q9HC38 313 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 C5orf60A6NFR6 353 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 POP4O95707 220 aaKnown RBP15.49■□□□□ 0.07
SEC13-215ENST00000477547 DNTTP04053 509 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 PSMB4P28070 264 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 SERPINA4P29622 427 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 STIP1P31948 543 aaKnown RBP15.49■□□□□ 0.07
SEC13-215ENST00000477547 CD68P34810 354 aaPredicted RBP15.49■□□□□ 0.07
SEC13-215ENST00000477547 CD86P42081 329 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 RPS14P62263 151 aaKnown RBP15.49■□□□□ 0.07
SEC13-215ENST00000477547 LMNB2Q03252 620 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 C2orf54Q08AI8 447 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 NSUN2Q08J23 767 aaKnown RBP eCLIP15.49■□□□□ 0.07
SEC13-215ENST00000477547 NIPAL4Q0D2K0 466 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 TUBB2AQ13885 445 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 GRM3Q14832 879 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 P3H1Q32P28 736 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 POM121L1PQ3SYA9 428 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 TTC31Q49AM3 519 aaPredicted RBP15.49■□□□□ 0.07
SEC13-215ENST00000477547 ARSIQ5FYB1 569 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 CFAP58Q5T655 872 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 NCEH1Q6PIU2 408 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 TMPRSS6Q8IU80 811 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 KLHL7Q8IXQ5 586 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 PAF1Q8N7H5 531 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 GRK7Q8WTQ7 553 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 PRCCQ92733 491 aaPredicted RBP15.49■□□□□ 0.07
SEC13-215ENST00000477547 LRIG1Q96JA1 1093 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 MRGPRX1Q96LB2 322 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 TUBB2BQ9BVA1 445 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 OSBPL1AQ9BXW6 950 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 NOD2Q9HC29 1040 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 DRG1Q9Y295 367 aaKnown RBP15.49■□□□□ 0.07
SEC13-215ENST00000477547 ACACBO00763 2458 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 SPAG17Q6Q759 2223 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 GPR179Q6PRD1 2367 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 SCN8AQ9UQD0 1980 aa15.49■□□□□ 0.07
SEC13-215ENST00000477547 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.48■□□□□ 0.07
SEC13-215ENST00000477547 K7ESF4 209 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 MID1O15344 667 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 ECEL1O95672 775 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 GAS8O95995 478 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 SERPINF2P08697 491 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 ACTN2P35609 894 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 METAP1P53582 386 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 BCL2L1Q07817 233 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 FAM46CQ5VWP2 391 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 MAMSTRQ6ZN01 415 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 RASSF3Q86WH2 238 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 C1orf210Q8IVY1 113 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 CAMKK1Q8N5S9 505 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 GLIS1Q8NBF1 620 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 SUMF1Q8NBK3 374 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 TMIEQ8NEW7 156 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 SPATA4Q8NEY3 305 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 ARRDC2Q8TBH0 407 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 SIPA1Q96FS4 1042 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 IMP4Q96G21 291 aaKnown RBP15.48■□□□□ 0.07
SEC13-215ENST00000477547 PPP1R16AQ96I34 528 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 CPEB1Q9BZB8 566 aaKnown RBP15.48■□□□□ 0.07
SEC13-215ENST00000477547 TPSD1Q9BZJ3 242 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 SLC25A51Q9H1U9 297 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 PABPC3Q9H361 631 aaKnown RBP15.48■□□□□ 0.07
SEC13-215ENST00000477547 DYRK4Q9NR20 520 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 SARDHQ9UL12 918 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 PPM1HQ9ULR3 514 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 CACNA1GO43497 2377 aa15.48■□□□□ 0.07
SEC13-215ENST00000477547 SOCS5O75159 536 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 GCATO75600 419 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 MMP2P08253 660 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 ACADMP11310 421 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 C5AR1P21730 350 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 CA4P22748 312 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 CES1P23141 567 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 ITGB7P26010 798 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 PXNP49023 591 aaPredicted RBP15.47■□□□□ 0.07
SEC13-215ENST00000477547 ZBTB16Q05516 673 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 TRAF2Q12933 501 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 FAXCQ5TGI0 409 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 ZC3H14Q6PJT7 736 aaKnown RBP15.47■□□□□ 0.07
SEC13-215ENST00000477547 TSSK4Q6SA08 328 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 GDPD4Q6W3E5 623 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 PARS2Q7L3T8 475 aaKnown RBP15.47■□□□□ 0.07
SEC13-215ENST00000477547 ZNF572Q7Z3I7 529 aaPredicted RBP15.47■□□□□ 0.07
SEC13-215ENST00000477547 PRUNE1Q86TP1 453 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 CAMK1DQ8IU85 385 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 TAB3Q8N5C8 712 aaPredicted RBP15.47■□□□□ 0.07
SEC13-215ENST00000477547 ATL2Q8NHH9 583 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 SPATA22Q8NHS9 363 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 VOPP1Q96AW1 172 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 NSMCE3Q96MG7 304 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 RUNDC3BQ96NL0 473 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 FCRL5Q96RD9 977 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 RBM15Q96T37 977 aaKnown RBP eCLIP15.47■□□□□ 0.07
SEC13-215ENST00000477547 TDRD1Q9BXT4 1180 aaKnown RBP15.47■□□□□ 0.07
SEC13-215ENST00000477547 PCDH9Q9HC56 1237 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 PAK5Q9P286 719 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 PLXNA2O75051 1894 aa15.47■□□□□ 0.07
SEC13-215ENST00000477547 A0A1W2PP55 124 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms