RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 STMND1H3BQB6 276 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 ACTL6BO94805 426 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 ZNF432O94892 652 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 TNFRSF6BO95407 300 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 PRSS2P07478 247 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 HSP90AB1P08238 724 aaKnown RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 CHRNB2P17787 502 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 IGFBP2P18065 325 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 MT3P25713 68 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 RASSF2P50749 326 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 PNLIPRP1P54315 467 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 ADPRHP54922 357 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 RBM6P78332 1123 aaKnown RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 TLE3Q04726 772 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 MTHFSDQ2M296 383 aaKnown RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 TBRG1Q3YBR2 411 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 TUBB8Q3ZCM7 444 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 DNTTIP2Q5QJE6 756 aaKnown RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 NFRKBQ6P4R8 1299 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 TMEM88Q6PEY1 159 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 FAM83HQ6ZRV2 1179 aaPredicted RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 Q6ZSV7 163 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 RAB11FIP2Q7L804 512 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 CAMK1DQ8IU85 385 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 SLC44A2Q8IWA5 706 aaPredicted RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 NKAPQ8N5F7 415 aaKnown RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 ATG16L2Q8NAA4 619 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 KDM1BQ8NB78 822 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 OR1N1Q8NGS0 311 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 FAM110DQ8TAY7 271 aaPredicted RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 APOLD1Q96LR9 279 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 PLEKHF1Q96S99 279 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 TMEM120AQ9BXJ8 343 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 B3GNT4Q9C0J1 378 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 PABPC3Q9H361 631 aaKnown RBP4.4□□□□□ -1.71
UBR3-209ENST00000477461 ARL15Q9NXU5 204 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 CNTN6Q9UQ52 1028 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 PKD1L3Q7Z443 1732 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 MEGF6O75095 1541 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 MAP3K5Q99683 1374 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 CYP3A7-CYP3A51PA0A087WV96 503 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 A0A087WYN8 130 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 AGAP5A6NIR3 686 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 C3orf70A6NLC5 250 aaPredicted RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 MCIDASD6RGH6 385 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 HTATSF1O43719 755 aaKnown RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 EIF3JO75822 258 aaKnown RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 ZBTB11O95625 1053 aaPredicted RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 LCKP06239 509 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 PKMP14618 531 aaKnown RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 VEGFAP15692 232 aaPredicted RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 CYP3A7P24462 503 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 GRK6P43250 576 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 GAS1P54826 345 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 AP2B1P63010 937 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 ZBTB16Q05516 673 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 TEFQ10587 303 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 GRAMD1BQ3KR37 738 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 TTC22Q5TAA0 569 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 LIN54Q6MZP7 749 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 AAGABQ6PD74 315 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 ZNF329Q86UD4 541 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 TMEM200AQ86VY9 491 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 KLBQ86Z14 1044 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 TRAPPC12Q8WVT3 735 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 SDCCAG3Q96C92 435 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 NPAS1Q99742 590 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 FRMD8Q9BZ67 464 aaPredicted RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 CATSPERBQ9H7T0 1116 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 ICAM5Q9UMF0 924 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 C19orf53Q9UNZ5 99 aaPredicted RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 DTX4Q9Y2E6 619 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 RAP2CQ9Y3L5 183 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 COPG1Q9Y678 874 aaKnown RBP4.39□□□□□ -1.71
UBR3-209ENST00000477461 ZBED9Q6R2W3 1325 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 GLI3P10071 1580 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 LRRC37A3O60309 1634 aa4.39□□□□□ -1.71
UBR3-209ENST00000477461 DISP2A7MBM2 1401 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 TNS2Q63HR2 1409 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 SCN11AQ9UI33 1791 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 TRBV5-7A0A0A0MS05 114 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 MBD3L5A6NJ08 208 aaPredicted RBP4.38□□□□□ -1.71
UBR3-209ENST00000477461 RNMTO43148 476 aaKnown RBP4.38□□□□□ -1.71
UBR3-209ENST00000477461 FAM155BO75949 473 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 CENPBP07199 599 aaPredicted RBP4.38□□□□□ -1.71
UBR3-209ENST00000477461 CST5P28325 142 aaPredicted RBP4.38□□□□□ -1.71
UBR3-209ENST00000477461 TRAPPC10P48553 1259 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 ART1P52961 327 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 TRIM14Q14142 442 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 FSCBQ5H9T9 825 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 C9orf50Q5SZB4 431 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 GFI1BQ5VTD9 330 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 CCDC174Q6PII3 467 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 SLC30A9Q6PML9 568 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 KLHL17Q6TDP4 642 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 KIAA1324Q6UXG2 1013 aaKnown RBP4.38□□□□□ -1.71
UBR3-209ENST00000477461 MCM10Q7L590 875 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 ARMC9Q7Z3E5 817 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 ANKS1BQ7Z6G8 1248 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 IGFN1Q86VF2 1251 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms