RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SLC12A1Q13621 1099 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 FRG1Q14331 258 aaKnown RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 CTC1Q2NKJ3 1217 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 GAB4Q2WGN9 574 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 TTC19Q6DKK2 380 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 SLC26A11Q86WA9 606 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 C12orf40Q86WS4 652 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 SRRM1Q8IYB3 904 aaKnown RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 BPIFB1Q8TDL5 484 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 CERS2Q96G23 380 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 MYADMQ96S97 322 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PLA2G2FQ9BZM2 168 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PPANQ9NQ55 473 aaKnown RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PRKAG3Q9UGI9 489 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 FBXO10Q9UK96 956 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 NUP210Q8TEM1 1887 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-206ENST00000477085 GOLGA8TH3BQL2 631 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 SLC9A3R1O14745 358 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-206ENST00000477085 CISD3P0C7P0 127 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 PABPC1P11940 636 aaKnown RBP14.59□□□□□ -0.07
COL4A6-206ENST00000477085 SRCP12931 536 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 ADRA1DP25100 572 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 LTBRP36941 435 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 ARCN1P48444 511 aaKnown RBP14.59□□□□□ -0.07
COL4A6-206ENST00000477085 MESP2Q0VG99 397 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 ADGRE1Q14246 886 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 GRIN2CQ14957 1233 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 PTPRRQ15256 657 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 SLC14A2Q15849 920 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 GEN1Q17RS7 908 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 RETSATQ6NUM9 610 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 KIAA1958Q8N8K9 716 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 OR6K2Q8NGY2 324 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 AGAP2Q99490 1192 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 FAM83CQ9BQN1 747 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 TDRD1Q9BXT4 1180 aaKnown RBP14.59□□□□□ -0.07
COL4A6-206ENST00000477085 TM6SF2Q9BZW4 377 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 TREX1Q9NSU2 369 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 CDH7Q9ULB5 785 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 RAI2Q9Y5P3 530 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 MTCH2Q9Y6C9 303 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 MYLKQ15746 1914 aa14.59□□□□□ -0.07
COL4A6-206ENST00000477085 PIRTP0C851 137 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 GKP32189 559 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 RHOAP61586 193 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 GUCY1A3Q02108 690 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 MGAT5Q09328 741 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 TRAF2Q12933 501 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 TEDDM1Q5T9Z0 273 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 VITQ6UXI7 678 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 SH2D5Q6ZV89 423 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 MARK2Q7KZI7 788 aaKnown RBP14.58□□□□□ -0.08
COL4A6-206ENST00000477085 IFT43Q96FT9 208 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 SERAC1Q96JX3 654 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 STMN4Q9H169 189 aaPredicted RBP14.58□□□□□ -0.08
COL4A6-206ENST00000477085 TNKS2Q9H2K2 1166 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 EBF3Q9H4W6 596 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 MRM3Q9HC36 420 aaKnown RBP14.58□□□□□ -0.08
COL4A6-206ENST00000477085 SLCO3A1Q9UIG8 710 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 ZNF180Q9UJW8 692 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 KCTD3Q9Y597 815 aa14.58□□□□□ -0.08
COL4A6-206ENST00000477085 MROH6A6NGR9 719 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 LDB2O43679 373 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 NDST3O95803 873 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 INHBAP08476 426 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 HOXB8P17481 243 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-206ENST00000477085 KRT15P19012 456 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 CES1P23141 567 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 CNGA3Q16281 694 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 HSP90AA5PQ58FG0 334 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 SRLQ86TD4 932 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.57□□□□□ -0.08
COL4A6-206ENST00000477085 PPHLN1Q8NEY8 458 aaKnown RBP14.57□□□□□ -0.08
COL4A6-206ENST00000477085 SORCS1Q8WY21 1168 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 RANBP9Q96S59 729 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 HPS4Q9NQG7 708 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 HS3ST2Q9Y278 367 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 SPO11Q9Y5K1 396 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 AURKAO14965 403 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 HOXC11O43248 304 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-206ENST00000477085 FZD6O60353 706 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 ADH5P11766 374 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 BRAFP15056 766 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 HLA-DPA1P20036 260 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 ATP5DP30049 168 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 SLC8A1P32418 973 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 SLC20A2Q08357 652 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 BMPR2Q13873 1038 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 SEPT6Q14141 434 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 PTPRCAPQ14761 206 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 ATAT1Q5SQI0 421 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 ZNF449Q6P9G9 518 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 PACS1Q6VY07 963 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 C4orf33Q8N1A6 199 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 OR13J1Q8NGT2 312 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 PTCD2Q8WV60 388 aaKnown RBP14.57□□□□□ -0.08
COL4A6-206ENST00000477085 KLF6Q99612 283 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-206ENST00000477085 TRABDQ9H4I3 376 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 C20orf96Q9NUD7 363 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms