RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ABI2Q9NYB9 513 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-208ENST00000476724 COL4A6Q14031 1691 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 CCDC78A2IDD5 438 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 PMPCBO75439 489 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 GALTP07902 379 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 THRAP10827 490 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 SAT1P21673 171 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 ARNTP27540 789 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 CD151P48509 253 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 CTBP1Q13363 440 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 FUT10Q6P4F1 479 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 ACAD11Q709F0 780 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 TMCO2Q7Z6W1 182 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 SETD3Q86TU7 594 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 SLC41A1Q8IVJ1 513 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 KIRREL3Q8IZU9 778 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 CENPLQ8N0S6 344 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 FAM136AQ96C01 138 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 ARMC5Q96C12 935 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 SLC39A13Q96H72 371 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 ZNF419Q96HQ0 510 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 RANBP9Q96S59 729 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 CCDC28BQ9BUN5 200 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 VPS45Q9NRW7 570 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 NDFIP2Q9NV92 336 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 OSER1Q9NX31 292 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 NDE1Q9NXR1 346 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 NYNRINQ9P2P1 1898 aaKnown RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 HEATR9A2RTY3 570 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 SYN3O14994 580 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 HOXA2O43364 376 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 PIGNO95427 931 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 RHOQP17081 205 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 TFEBP19484 476 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 SERPINB5P36952 375 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 GPR15P49685 360 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 CNGA3Q16281 694 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 ARL13AQ5H913 290 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 SDHAF4Q5VUM1 108 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 TAS1R1Q7RTX1 841 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 TMC7Q7Z402 723 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 APLFQ8IW19 511 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 DENND6AQ8IWF6 608 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 PHTF2Q8N3S3 785 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 MAPK15Q8TD08 544 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 ZNF184Q99676 751 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 MRPL57Q9BQC6 102 aaKnown RBP16.61■□□□□ 0.25
TMEM53-208ENST00000476724 OSBPL1AQ9BXW6 950 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 CDH22Q9UJ99 828 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 FBXO5Q9UKT4 447 aa16.61■□□□□ 0.25
TMEM53-208ENST00000476724 A6NHS1 94 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 E9PBE3 544 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 ZBTB14O43829 449 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 NPHS1O60500 1241 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 KLHL41O60662 606 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 PARNO95453 639 aaKnown RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MOCS2O96007 188 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 CLTBP09497 229 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 PGFP49763 221 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 NAGLUP54802 743 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 SLC12A2P55011 1212 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 WNT3AP56704 352 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MPP1Q00013 466 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 ILF2Q12905 390 aaKnown RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MRPL58Q14197 206 aaKnown RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 CTXN3Q4LDR2 81 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 RALGPS1Q5JS13 557 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 RTP2Q5QGT7 225 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 ACBD5Q5T8D3 534 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 RSPO2Q6UXX9 243 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 C14orf80Q86SX3 495 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 CPSF7Q8N684 471 aaKnown RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 TTC9BQ8N6N2 239 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MICAL1Q8TDZ2 1067 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 GPR78Q96P69 363 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MRPL46Q9H2W6 279 aaKnown RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 S100A14Q9HCY8 104 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MAN1C1Q9NR34 630 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MPP6Q9NZW5 540 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 WASF2Q9Y6W5 498 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 LTBP2Q14767 1821 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 LOC100653049A0A140TA62 436 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 RGSL1A5PLK6 1076 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 KIF1CO43896 1103 aaKnown RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 KRT34O76011 436 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 PAPSS2O95340 614 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 CHRNGP07510 517 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 ITGAXP20702 1163 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 FGFR3P22607 806 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MPSTP25325 297 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 AVPR1AP37288 418 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 SLC1A2P43004 574 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 CUL3Q13618 768 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 PIK3R6Q5UE93 754 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 NEPROQ6NW34 567 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 CNKSR3Q6P9H4 555 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 KDELC1Q6UW63 502 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 FRMD7Q6ZUT3 714 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 DEFB107AQ8IZN7 70 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 RP9Q8TA86 221 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms