RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 A4D1N5 150 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 OR2A25A4D2G3 310 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 BTBD18B2RXH4 712 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 M0QYT0 321 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 PER2O15055 1255 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 SCAMP1O15126 338 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 PAGE4O60829 102 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 CD19P15391 556 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 CAPN2P17655 700 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 GABRB1P18505 474 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 KRT4P19013 534 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 CHRM3P20309 590 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 ITGB8P26012 769 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 DGKQP52824 942 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 CSE1LP55060 971 aaKnown RBP7.08□□□□□ -1.28
LRCH3-215ENST00000476664 NPEPPSP55786 919 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 ZNF844Q08AG5 666 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 ABHD18Q0P651 414 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 CSTF3Q12996 717 aaKnown RBP7.08□□□□□ -1.28
LRCH3-215ENST00000476664 SEMA3BQ13214 749 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 SF3B3Q15393 1217 aaKnown RBP7.08□□□□□ -1.28
LRCH3-215ENST00000476664 NHSL2Q5HYW2 709 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 ADGRF1Q5T601 910 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 FAM171A1Q5VUB5 890 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 TAPT1Q6NXT6 567 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 OTOAQ7RTW8 1153 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 SLC46A3Q7Z3Q1 461 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 KBTBD6Q86V97 674 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 MINDY1Q8N5J2 469 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 ANKRD53Q8N9V6 530 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 ZFP28Q8NHY6 868 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 KCNE4Q8WWG9 221 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 MR1Q95460 341 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 TMCO6Q96DC7 493 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 LRIG1Q96JA1 1093 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 ZBTB45Q96K62 511 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-215ENST00000476664 WDFY2Q96P53 400 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 NPAS1Q99742 590 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 CCDC106Q9BWC9 280 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 OSGEPL1Q9H4B0 414 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 SCPEP1Q9HB40 452 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 NRIP3Q9NQ35 241 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 IL1RAPL1Q9NZN1 696 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 NDRG4Q9ULP0 352 aaKnown RBP7.08□□□□□ -1.28
LRCH3-215ENST00000476664 SLC12A4Q9UP95 1085 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 NIP7Q9Y221 180 aaKnown RBP eCLIP7.08□□□□□ -1.28
LRCH3-215ENST00000476664 RTL9Q8NET4 1388 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 GRM8O00222 908 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 LDLRAD4O15165 306 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 IPO7O95373 1038 aaKnown RBP7.07□□□□□ -1.28
LRCH3-215ENST00000476664 OLFM2O95897 454 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 GLI1P08151 1106 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 CYP3A4P08684 503 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 SDHBP21912 280 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 CTGFP29279 349 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 PPIFP30405 207 aaKnown RBP7.07□□□□□ -1.28
LRCH3-215ENST00000476664 HNF1BP35680 557 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 PBX1P40424 430 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 MTHFRP42898 656 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 PIP4K2AP48426 406 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-215ENST00000476664 GSK3AP49840 483 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 NT5C2P49902 561 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 NPY4RP50391 375 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 SLC12A3P55017 1021 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 YBX1P67809 324 aaKnown RBP7.07□□□□□ -1.28
LRCH3-215ENST00000476664 TLE3Q04726 772 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 FRG1Q14331 258 aaKnown RBP7.07□□□□□ -1.28
LRCH3-215ENST00000476664 BMT2Q1RMZ1 405 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 ANKDD1AQ495B1 522 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 TOR1AIP1Q5JTV8 583 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 SPDYAQ5MJ70 313 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 OLFML2BQ68BL8 750 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 SUSD1Q6UWL2 747 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 LINC00696Q6ZRV3 163 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 GSTA5Q7RTV2 222 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 GPRIN1Q7Z2K8 1008 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 IGDCC3Q8IVU1 814 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 WDR63Q8IWG1 891 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 SIX6OS1Q8N1H7 587 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 BEND7Q8N7W2 519 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-215ENST00000476664 ZNF540Q8NDQ6 660 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 RAB40AQ8WXH6 277 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 RBM18Q96H35 190 aaKnown RBP7.07□□□□□ -1.28
LRCH3-215ENST00000476664 SLC25A23Q9BV35 468 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 TLR10Q9BXR5 811 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 EPC1Q9H2F5 836 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 ST6GALNAC4Q9H4F1 302 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 TASP1Q9H6P5 420 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 POLR1BQ9H9Y6 1135 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 GCM1Q9NP62 436 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 KLHL14Q9P2G3 628 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 FBXL17Q9UF56 701 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 RIMKLBQ9ULI2 386 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 NENFQ9UMX5 172 aa7.07□□□□□ -1.28
LRCH3-215ENST00000476664 DDX60Q8IY21 1712 aaKnown RBP7.07□□□□□ -1.28
LRCH3-215ENST00000476664 TPRP12270 2363 aaKnown RBP7.06□□□□□ -1.28
LRCH3-215ENST00000476664 WDR87Q6ZQQ6 2873 aa7.06□□□□□ -1.28
LRCH3-215ENST00000476664 LRRC53A6NM62 1247 aa7.06□□□□□ -1.28
LRCH3-215ENST00000476664 TBKBP1A7MCY6 615 aa7.06□□□□□ -1.28
LRCH3-215ENST00000476664 C1QTNF9BB2RNN3 333 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms