RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 UBAP2Q5T6F2 1119 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 TPGS2Q68CL5 300 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 SLC9A4Q6AI14 798 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 DCUN1D2Q6PH85 259 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CCDC137Q6PK04 289 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 RNF111Q6ZNA4 994 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 SYDE1Q6ZW31 735 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 HTR3DQ70Z44 454 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 HEATR3Q7Z4Q2 680 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 SLC22A16Q86VW1 577 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 MIB1Q86YT6 1006 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 LACC1Q8IV20 430 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 NUDCD3Q8IVD9 361 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 GJD3Q8N144 294 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 C4orf33Q8N1A6 199 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 SRFBP1Q8NEF9 429 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 OR4D10Q8NGI6 311 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 ZNF296Q8WUU4 475 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 PYDC1Q8WXC3 89 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 ST8SIA2Q92186 375 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 SMG7Q92540 1137 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 CELF1Q92879 486 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 EDC3Q96F86 508 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 CNDP2Q96KP4 475 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 RIPOR3Q96MK2 946 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 ASB2Q96Q27 587 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CRAMP1Q96RY5 1269 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 RIT2Q99578 217 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 TRAF4Q9BUZ4 470 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 ZNF341Q9BYN7 854 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 LRRC2Q9BYS8 371 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 GCOM2Q9BZD3 368 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 ZCCHC2Q9C0B9 1178 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 TTYH3Q9C0H2 523 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 OSGEPL1Q9H4B0 414 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 RSAD1Q9HA92 442 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CNNM1Q9NRU3 951 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 KCNH7Q9NS40 1196 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 C20orf96Q9NUD7 363 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 ZDHHC18Q9NUE0 388 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 ACOXLQ9NUZ1 547 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 FBXO28Q9NVF7 368 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 DNAJC17Q9NVM6 304 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 B3GNT2Q9NY97 397 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PPARGC1AQ9UBK2 798 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 ZMYM5Q9UJ78 669 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PTBP2Q9UKA9 531 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 CDC14AQ9UNH5 594 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PLA2G4CQ9UP65 541 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 MAP3K2Q9Y2U5 619 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 NOC2LQ9Y3T9 749 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 PCDHB12Q9Y5F1 795 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 USP42Q9H9J4 1324 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 NEURL4Q96JN8 1562 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 A0A0G2JPF8 293 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 ISPDA4D126 451 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 EFCAB10A6NFE3 127 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 HNRNPCL3B7ZW38 293 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 DNALI1O14645 258 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 RIPK2O43353 540 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 BUB1O43683 1085 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 SYNCRIPO60506 623 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 ZNF623O75123 536 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 BCAS1O75363 584 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 PPM1BO75688 479 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PALMO75781 387 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 TP53P04637 393 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 SERPINB2P05120 415 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 GSNP06396 782 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PROS1P07225 676 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 H2AFB1P0C5Y9 115 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 H2AFB2P0C5Z0 115 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CLEC2LP0C7M8 214 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 HNRNPCL4P0DMR1 293 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PF4V1P10720 104 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 MCF2P10911 925 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PSKH1P11801 424 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CYP11B1P15538 503 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 MMP8P22894 467 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 MAP4P27816 1152 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 ID4P47928 161 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 LEPRP48357 1165 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 CCT4P50991 539 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 MAPK12P53778 367 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 DRG2P55039 364 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 PSMC5P62195 406 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 RPL10AP62906 217 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 ZNF200P98182 395 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 CTBSQ01459 385 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 KLRC3Q07444 240 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 MGAT3Q09327 533 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 TRAF2Q12933 501 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 BNIP2Q12982 314 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PRKG2Q13237 762 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 DNASE1L3Q13609 305 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 MPP2Q14168 576 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 TRIM25Q14258 630 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 STAT4Q14765 748 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 FASTKD3Q14CZ7 662 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 MORF4L2Q15014 288 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms