RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 RAB7BQ96AH8 199 aa29.87■■■□□ 2.37
HOXB3-208ENST00000476342 HSPA12BQ96MM6 686 aa29.87■■■□□ 2.37
HOXB3-208ENST00000476342 TTC24A2A3L6 582 aaPredicted RBP29.86■■■□□ 2.37
HOXB3-208ENST00000476342 SOCS5O75159 536 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 PTPN3P26045 913 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 CXCR5P32302 372 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 GNG11P61952 73 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 DEFB119Q8N690 84 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 MAIP1Q8WWC4 291 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 AGAP3Q96P47 875 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 PHOX2BQ99453 314 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 FAM118BQ9BPY3 351 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 CEP41Q9BYV8 373 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 FRMD8P1Q9BZ68 369 aaPredicted RBP29.86■■■□□ 2.37
HOXB3-208ENST00000476342 GMEB2Q9UKD1 530 aa29.86■■■□□ 2.37
HOXB3-208ENST00000476342 A0A1W2PQ67 120 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 TCRBV7S2A1N4TA0A589 114 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 MEI4A8MW99 385 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 CEP104O60308 925 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 ATP1A1P05023 1023 aaKnown RBP29.85■■■□□ 2.37
HOXB3-208ENST00000476342 XPAP23025 273 aaPredicted RBP29.85■■■□□ 2.37
HOXB3-208ENST00000476342 DSC2Q02487 901 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 SYCP2LQ5T4T6 812 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 LYSMD4Q5XG99 296 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 DARS2Q6PI48 645 aaKnown RBP29.85■■■□□ 2.37
HOXB3-208ENST00000476342 ARMCX6Q7L4S7 300 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 CNTD1Q8N815 330 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 PBKQ96KB5 322 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 C6orf106Q9H6K1 298 aaPredicted RBP29.85■■■□□ 2.37
HOXB3-208ENST00000476342 PREBQ9HCU5 417 aa29.85■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3DA0A087WVF3 549 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3IA0A087WXS9 549 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3EA0A087X179 549 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3KA0A087X1G2 549 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TSPAN11A1L157 253 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3FA6NER0 549 aaPredicted RBP29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3LB9A6J9 549 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 SERPINF2P08697 491 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3HP0C7X1 549 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 RBL1P28749 1068 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 PTGER3P43115 390 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3GQ6DHY5 549 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3CQ6IPX1 549 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TTC7BQ86TV6 843 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 SLC41A1Q8IVJ1 513 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TBC1D3Q8IZP1 549 aaPredicted RBP29.84■■■□□ 2.37
HOXB3-208ENST00000476342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP29.84■■■□□ 2.37
HOXB3-208ENST00000476342 ECHDC3Q96DC8 303 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TEKT5Q96M29 485 aa29.84■■■□□ 2.37
HOXB3-208ENST00000476342 KLHL8Q9P2G9 620 aaPredicted RBP29.84■■■□□ 2.37
HOXB3-208ENST00000476342 TPX2Q9ULW0 747 aaKnown RBP29.84■■■□□ 2.37
HOXB3-208ENST00000476342 BCLAF3A2AJT9 711 aaKnown RBP29.83■■■□□ 2.37
HOXB3-208ENST00000476342 METTL12A8MUP2 240 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 TRAFD1O14545 582 aaPredicted RBP29.83■■■□□ 2.37
HOXB3-208ENST00000476342 AP1G1O43747 822 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 FGGP02679 453 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 CA4P22748 312 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 SUOXP51687 545 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 TAS2R38P59533 333 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 POLR2LP62875 67 aaKnown RBP29.83■■■□□ 2.37
HOXB3-208ENST00000476342 WASHC5Q12768 1159 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 KIAA0895LQ68EN5 471 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 ADAT2Q7Z6V5 191 aaKnown RBP29.83■■■□□ 2.37
HOXB3-208ENST00000476342 ARRDC2Q8TBH0 407 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 TRIM44Q96DX7 344 aaPredicted RBP29.83■■■□□ 2.37
HOXB3-208ENST00000476342 R3HDM2Q9Y2K5 976 aaKnown RBP29.83■■■□□ 2.37
HOXB3-208ENST00000476342 PCDHGC4Q9Y5F7 938 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 PCDHGA5Q9Y5G8 931 aa29.83■■■□□ 2.37
HOXB3-208ENST00000476342 TNRC6BQ9UPQ9 1833 aaKnown RBP29.83■■■□□ 2.37
HOXB3-208ENST00000476342 PRR23AA6NEV1 266 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 HTRA2O43464 458 aaPredicted RBP29.82■■■□□ 2.36
HOXB3-208ENST00000476342 STK10O94804 968 aaKnown RBP29.82■■■□□ 2.36
HOXB3-208ENST00000476342 EPN2O95208 641 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 DPP6P42658 865 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 WDR45BQ5MNZ6 344 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 NEK5Q6P3R8 708 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 CYP2U1Q7Z449 544 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 PDCD6IPQ8WUM4 868 aaKnown RBP29.82■■■□□ 2.36
HOXB3-208ENST00000476342 NSMCE3Q96MG7 304 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 NCDNQ9UBB6 729 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 TRHDEQ9UKU6 1024 aa29.82■■■□□ 2.36
HOXB3-208ENST00000476342 ZBTB32Q9Y2Y4 487 aaPredicted RBP29.82■■■□□ 2.36
HOXB3-208ENST00000476342 FSBPO95073 299 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 RETP07949 1114 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 ABL2P42684 1182 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 CREB5Q02930 508 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 UGP2Q16851 508 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 HS1BP3Q53T59 392 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 SLC35B2Q8TB61 432 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 SNX19Q92543 992 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 SLC25A51Q9H1U9 297 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 C10orf88Q9H8K7 445 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 GLOD4Q9HC38 313 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 ZKSCAN5Q9Y2L8 839 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 RAI2Q9Y5P3 530 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 FADS3Q9Y5Q0 445 aa29.81■■■□□ 2.36
HOXB3-208ENST00000476342 UPK3BL1B0FP48 263 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 UPK3BL2E5RIL1 263 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 NEMP1O14524 444 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 KCNN4O15554 427 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms