RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CDH23Q9H251 3354 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 A0A087WZ62 844 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 TCAF2A6NFQ2 919 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 H3BNC9 293 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 I6L893 689 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 INO80B-WBP1J3KQ70 363 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 AP3B1O00203 1094 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 GABRDO14764 452 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 HDAC3O15379 428 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 NCAM2O15394 837 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 MFSD11O43934 449 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 NPHS1O60500 1241 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 SORBS2O94875 1100 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 WISP3O95389 354 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 FYNP06241 537 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 RB1P06400 928 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 C2P06681 752 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 POLBP06746 335 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 UBTFL6P0CB48 400 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 KCNE1P15382 129 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 CD1EP15812 388 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 WARSP23381 471 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 MGAT1P26572 445 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 PIK3R1P27986 724 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 PEX2P28328 305 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 CD68P34810 354 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 NOS2P35228 1153 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 RPL5P46777 297 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 ALDH1A3P47895 512 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 ALDH3B2P48448 385 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 MRPL19P49406 292 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 CLCN3P51790 818 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 TKTL1P51854 596 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 ATXN1P54253 815 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 BCAT1P54687 386 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 AQP4P55087 323 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 FOLH1Q04609 750 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 PPIDQ08752 370 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 GPM6BQ13491 265 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 BTG3Q14201 252 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 PTK2BQ14289 1009 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 SLC14A2Q15849 920 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 ADRM1Q16186 407 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 SLC9B1Q4ZJI4 515 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 PPM1JQ5JR12 505 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 RAB41Q5JT25 222 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 FSTL4Q6MZW2 842 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 DHRS4L2Q6PKH6 230 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 ZYG11AQ6WRX3 759 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 HACD2Q6Y1H2 254 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 DNAJC14Q6Y2X3 702 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 PAQR9Q6ZVX9 377 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 BEND5Q7L4P6 421 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 SPRED2Q7Z698 418 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 HPS6Q86YV9 775 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 NPAS4Q8IUM7 802 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 DEFB107AQ8IZN7 70 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 LILRA2Q8N149 483 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 ZNF781Q8N8C0 355 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 KDM1BQ8NB78 822 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 GOLM1Q8NBJ4 401 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 CATSPER1Q8NEC5 780 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 TRAPPC12Q8WVT3 735 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 PYDC1Q8WXC3 89 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 COL26A1Q96A83 441 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 HDAC11Q96DB2 347 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 GBP5Q96PP8 586 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 OR52B2Q96RD2 323 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 VAT1Q99536 393 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 NDNQ99608 321 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 TTC1Q99614 292 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 DDX50Q9BQ39 737 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 FERMT1Q9BQL6 677 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 FDXACB1Q9BRP7 624 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 MLPHQ9BV36 600 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 B3GNT5Q9BYG0 378 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 TRIM4Q9C037 500 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 LMAN2LQ9H0V9 348 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 NSUN3Q9H649 340 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 UBE2ZQ9H832 354 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 NGRNQ9NPE2 291 aaKnown RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 MRGBPQ9NV56 204 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 SYBUQ9NX95 663 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.95□□□□□ -1.36e-9■□□□□ 8.7
UBR4-212ENST00000475973 ATXN10Q9UBB4 475 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 VTI1BQ9UEU0 232 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 MARCOQ9UEW3 520 aaPredicted RBP6.95□□□□□ -1.3
UBR4-212ENST00000475973 LRFN2Q9ULH4 789 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 FAM50BQ9Y247 325 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 GINS2Q9Y248 185 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 MFHAS1Q9Y4C4 1052 aa6.95□□□□□ -1.3
UBR4-212ENST00000475973 EIF4E1BA6NMX2 242 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 KPNA7A9QM74 516 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 RNF103O00237 685 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 PPEF2O14830 753 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 TRIM24O15164 1050 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 MTSS1O43312 755 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 TIMM44O43615 452 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 ICMTO60725 284 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms