RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 ENTPD1P49961 510 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 EFNA5P52803 228 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 CLDN2P57739 230 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 ARF3P61204 181 aaPredicted RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 DCAF7P61962 342 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 RPL7AP62424 266 aaKnown RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 ARF1P84077 181 aaKnown RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 PPATQ06203 517 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 ITGADQ13349 1161 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 ARHGEF6Q15052 776 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 Q5PR19 223 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 ASPHD1Q5U4P2 390 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 LRRC8EQ6NSJ5 796 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 CDC73Q6P1J9 531 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 PARM1Q6UWI2 310 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 COLCA1Q6ZS62 124 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 GSTA5Q7RTV2 222 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 DENND6AQ8IWF6 608 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 PDILTQ8N807 584 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 ANKRD52Q8NB46 1076 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 GJC3Q8NFK1 279 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 TMEM18Q96B42 140 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 OTULINQ96BN8 352 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 WDR77Q9BQA1 342 aaPredicted RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 MVB12BQ9H7P6 319 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 PRKRIP1Q9H875 184 aaPredicted RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 A4GNTQ9UNA3 340 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 TDRD9Q8NDG6 1382 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 A0A1W2PQM1 296 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 PI4KAP2A4QPH2 592 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 KLRF2D3W0D1 207 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 F5H0A9 414 aaPredicted RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 SOCS2O14508 198 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 USO1O60763 962 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 ZBED4O75132 1171 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 TIPRLO75663 272 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 RNASEH2AO75792 299 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 MTA2O94776 668 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 EPN2O95208 641 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 CYP1A2P05177 515 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 TTKP33981 857 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 NAP1L1P55209 391 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 TMEM115Q12893 351 aaPredicted RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 ERV3-1Q14264 604 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 GPR18Q14330 331 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 RNPS1Q15287 305 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 PLEKHO1Q53GL0 409 aaPredicted RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 PRAMEF19Q5SWL8 479 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 GPATCH4Q5T3I0 446 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 KLHL24Q6TFL4 600 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 CTU1Q7Z7A3 348 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 PIP4P1Q86T03 277 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 PIM3Q86V86 326 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 ZCCHC9Q8N567 271 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 NRACQ8N912 160 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 MCPH1Q8NEM0 835 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 GABPB2Q8TAK5 448 aaPredicted RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 BICD2Q8TD16 824 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 TIGD1Q96MW7 591 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 BARD1Q99728 777 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 CHCHD6Q9BRQ6 235 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 NPFFR1Q9GZQ6 430 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 KLHL31Q9H511 634 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 CATSPERBQ9H7T0 1116 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 PLEKHA5Q9HAU0 1116 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 BRF2Q9HAW0 419 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 BPIFA1Q9NP55 256 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 SIRT3Q9NTG7 399 aaPredicted RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 BLOC1S4Q9NUP1 217 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 NCKIPSDQ9NZQ3 722 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 ZNF70Q9UC06 446 aaPredicted RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 NDRG3Q9UGV2 375 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 LIMA1Q9UHB6 759 aaKnown RBP4.3□□□□□ -1.72
SDHB-204ENST00000475049 MKLN1Q9UL63 735 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 PSAT1Q9Y617 370 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 PIAS3Q9Y6X2 628 aa4.3□□□□□ -1.72
SDHB-204ENST00000475049 HSPB2A8KAH6 182 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 KDM4EB2RXH2 506 aaPredicted RBP4.29□□□□□ -1.72
SDHB-204ENST00000475049 CHL1O00533 1208 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 BCAT2O15382 392 aaPredicted RBP4.29□□□□□ -1.72
SDHB-204ENST00000475049 DDX58O95786 925 aaKnown RBP4.29□□□□□ -1.72
SDHB-204ENST00000475049 MT-CYBP00156 380 aaPredicted RBP4.29□□□□□ -1.72
SDHB-204ENST00000475049 TFP02787 698 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 KRT10P13645 584 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 SRD5A1P18405 259 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 ICAM3P32942 547 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 RYKP34925 604 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 BSGP35613 385 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 GABRB2P47870 512 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 ZNF81P51508 661 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 OLR1P78380 273 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 MAMLD1Q13495 774 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 FRG1Q14331 258 aaKnown RBP4.29□□□□□ -1.72
SDHB-204ENST00000475049 LPIN1Q14693 890 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 HSPB2Q16082 182 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 CCNG2Q16589 344 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 COLEC12Q5KU26 742 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 DCAF12L2Q5VW00 463 aa4.29□□□□□ -1.72
SDHB-204ENST00000475049 TXNDC8Q6A555 127 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms