RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 DFFAO00273 331 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 TSPAN6O43657 245 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 AP1G1O43747 822 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 LDOC1O95751 146 aaPredicted RBP9.55□□□□□ -0.88
PDPN-204ENST00000475043 GYPCP04921 128 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 FAM228BP0C875 321 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 ERCC2P18074 760 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 XPAP23025 273 aaPredicted RBP9.55□□□□□ -0.88
PDPN-204ENST00000475043 CASP14P31944 242 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 ABL2P42684 1182 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 PAPOLAP51003 745 aaKnown RBP9.55□□□□□ -0.88
PDPN-204ENST00000475043 ACAP1Q15027 740 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 CYTH1Q15438 398 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 SMTNL2Q2TAL5 461 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 CCDC122Q5T0U0 273 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 CFAP58Q5T655 872 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 GCNT7Q6ZNI0 430 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 PTAR1Q7Z6K3 402 aaPredicted RBP9.55□□□□□ -0.88
PDPN-204ENST00000475043 PAF1Q8N7H5 531 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 TMEM145Q8NBT3 493 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 OR13H1Q8NG92 308 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 HSPH1Q92598 858 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 GATA6Q92908 595 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 CNDP2Q96KP4 475 aaKnown RBP9.55□□□□□ -0.88
PDPN-204ENST00000475043 XPO4Q9C0E2 1151 aaKnown RBP9.55□□□□□ -0.88
PDPN-204ENST00000475043 SLC39A8Q9C0K1 460 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 ZWILCHQ9H900 591 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 TOR4AQ9NXH8 423 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 ANAPC7Q9UJX3 599 aa9.55□□□□□ -0.88
PDPN-204ENST00000475043 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDPN-204ENST00000475043 POM121BA6NF01 834 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 IGLON5A6NGN9 336 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 H3BRJ5 948 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 ENC1O14682 589 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 FPGTO14772 594 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 INSIG1O15503 277 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 PALMO75781 387 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 PIGNO95427 931 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 PCK1P35558 622 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 ARL4AP40617 200 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 SSR1P43307 286 aaKnown RBP9.54□□□□□ -0.88
PDPN-204ENST00000475043 RXRGP48443 463 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 DNAJC3Q13217 504 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 FGL2Q14314 439 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 PIGHQ14442 188 aaPredicted RBP9.54□□□□□ -0.88
PDPN-204ENST00000475043 ALKBH5Q6P6C2 394 aaKnown RBP9.54□□□□□ -0.88
PDPN-204ENST00000475043 DHRS13Q6UX07 377 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 Q6ZSR6 202 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 CYP4V2Q6ZWL3 525 aaPredicted RBP9.54□□□□□ -0.88
PDPN-204ENST00000475043 PSTKQ8IV42 348 aaKnown RBP9.54□□□□□ -0.88
PDPN-204ENST00000475043 CXorf40AQ8TE69 158 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 BTBD6Q96KE9 485 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 NUP85Q9BW27 656 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 SLC6A16Q9GZN6 736 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 SP110Q9HB58 689 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 PDFQ9HBH1 243 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDPN-204ENST00000475043 DNAJC28Q9NX36 388 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 CWC15Q9P013 229 aaKnown RBP9.54□□□□□ -0.88
PDPN-204ENST00000475043 LHX3Q9UBR4 397 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 IPO11Q9UI26 975 aaKnown RBP9.54□□□□□ -0.88
PDPN-204ENST00000475043 ZMIZ1Q9ULJ6 1067 aa9.54□□□□□ -0.88
PDPN-204ENST00000475043 TDRD6O60522 2096 aaKnown RBP9.54□□□□□ -0.88
PDPN-204ENST00000475043 PLXNB3Q9ULL4 1909 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 SPEGQ15772 3267 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 FAM221BA6H8Z2 402 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 TMEM8BA6NDV4 472 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 MYO1FO00160 1098 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 RAD51BO15315 384 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 CBFA2T2O43439 604 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 PRAMEF11O60813 436 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 MMP20O60882 483 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 KRT37O76014 449 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 TCF4P15884 667 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 ITIH2P19823 946 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 IL1R2P27930 398 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 HCAR3P49019 387 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 ZNF135P52742 658 aaPredicted RBP9.53□□□□□ -0.88
PDPN-204ENST00000475043 GRM3Q14832 879 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 BOLA3Q53S33 107 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 HS1BP3Q53T59 392 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 ZNF542PQ5EBM4 170 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 TMCO3Q6UWJ1 677 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 ARHGAP36Q6ZRI8 547 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 ABI3BPQ7Z7G0 1075 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 ZSCAN30Q86W11 494 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 DCP2Q8IU60 420 aaKnown RBP9.53□□□□□ -0.88
PDPN-204ENST00000475043 SLC22A18ASQ8N1D0 253 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 GALNT15Q8N3T1 639 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 NPWQ8N729 165 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 TSEN2Q8NCE0 465 aaKnown RBP9.53□□□□□ -0.88
PDPN-204ENST00000475043 RNF214Q8ND24 703 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 FAM174AQ8TBP5 190 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 ZCCHC14Q8WYQ9 949 aaKnown RBP9.53□□□□□ -0.88
PDPN-204ENST00000475043 BMFQ96LC9 184 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 WRAP53Q9BUR4 548 aaKnown RBP9.53□□□□□ -0.88
PDPN-204ENST00000475043 CINPQ9BW66 212 aaPredicted RBP9.53□□□□□ -0.88
PDPN-204ENST00000475043 C1QTNF2Q9BXJ5 285 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms