RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 TMBIM4Q9HC24 238 aa20.49■□□□□ 0.87
EDEM3-206ENST00000474725 DEC1Q9P2X7 70 aa20.49■□□□□ 0.87
EDEM3-206ENST00000474725 CHKBQ9Y259 395 aa20.49■□□□□ 0.87
EDEM3-206ENST00000474725 PCDHGC4Q9Y5F7 938 aa20.49■□□□□ 0.87
EDEM3-206ENST00000474725 RAI2Q9Y5P3 530 aa20.49■□□□□ 0.87
EDEM3-206ENST00000474725 RASGRF2O14827 1237 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 PIAS1O75925 651 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 EPOP01588 193 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 GSTA2P09210 222 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 MYZAPP0CAP1 466 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 HTR4Q13639 388 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 POU6F1Q14863 301 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 SKIV2LQ15477 1246 aaKnown RBP20.48■□□□□ 0.87
EDEM3-206ENST00000474725 ACCSLQ4AC99 568 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 NAIF1Q69YI7 327 aaPredicted RBP20.48■□□□□ 0.87
EDEM3-206ENST00000474725 GRAMD4Q6IC98 578 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 OR6K2Q8NGY2 324 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 GSDMBQ8TAX9 411 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 ROPN1BQ9BZX4 212 aaPredicted RBP20.48■□□□□ 0.87
EDEM3-206ENST00000474725 CIPCQ9C0C6 399 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 CENPHQ9H3R5 247 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 ROPN1Q9HAT0 212 aaPredicted RBP20.48■□□□□ 0.87
EDEM3-206ENST00000474725 CHRAC1Q9NRG0 131 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 EVLQ9UI08 416 aaPredicted RBP20.48■□□□□ 0.87
EDEM3-206ENST00000474725 MIA3Q5JRA6 1907 aa20.48■□□□□ 0.87
EDEM3-206ENST00000474725 EXOC1LA0A1B0GW35 172 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 MAGEB16A2A368 324 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 ANHXE9PGG2 379 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 GJA4P35212 333 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 KDSRQ06136 332 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 GALNT3Q14435 633 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 EFTUD2Q15029 972 aaKnown RBP eCLIP20.47■□□□□ 0.87
EDEM3-206ENST00000474725 DLG2Q15700 870 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 RALGPS1Q5JS13 557 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 PCID2Q5JVF3 399 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 C22orf39Q6P5X5 142 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 PPM1EQ8WY54 764 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 ISG20Q96AZ6 181 aaKnown RBP20.47■□□□□ 0.87
EDEM3-206ENST00000474725 MRGPRX3Q96LB0 322 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 FCRL3Q96P31 734 aaPredicted RBP20.47■□□□□ 0.87
EDEM3-206ENST00000474725 TDRD1Q9BXT4 1180 aaKnown RBP20.47■□□□□ 0.87
EDEM3-206ENST00000474725 ACSS3Q9H6R3 686 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 PRDM4Q9UKN5 801 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 SOX13Q9UN79 622 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 GOLGA6L10A6NI86 522 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 POC1B-GALNT4F8VUJ3 575 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 MBTPS2O43462 519 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 TCEA3O75764 348 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 IGSF6O95976 241 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 POLBP06746 335 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 HLA-DPA1P20036 260 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 GKP32189 559 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 OPRD1P41143 372 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 CSNK1DP48730 415 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 AP1S1P61966 158 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 TRAF2Q12933 501 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 MSLNQ13421 630 aaPredicted RBP20.47■□□□□ 0.87
EDEM3-206ENST00000474725 CRYMQ14894 314 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 TTMPQ5BVD1 217 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 TRMT10BQ6PF06 316 aaKnown RBP20.47■□□□□ 0.87
EDEM3-206ENST00000474725 OR2AP1Q8NGE2 309 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 CEP44Q9C0F1 390 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 RPS6KL1Q9Y6S9 549 aa20.47■□□□□ 0.87
EDEM3-206ENST00000474725 COL4A3Q01955 1670 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 PRRT4C9JH25 899 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 NDST3O95803 873 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 PRLP01236 227 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 PDHA1P08559 390 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 GCAP28676 217 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 STX2P32856 288 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 SMAD4Q13485 552 aaKnown RBP20.46■□□□□ 0.87
EDEM3-206ENST00000474725 TMEM135Q86UB9 458 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 UNC5BQ8IZJ1 945 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 RYBPQ8N488 228 aaPredicted RBP20.46■□□□□ 0.87
EDEM3-206ENST00000474725 NXPE3Q969Y0 559 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 MRRFQ96E11 262 aaKnown RBP20.46■□□□□ 0.87
EDEM3-206ENST00000474725 KIFC1Q9BW19 673 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 ELOVL2Q9NXB9 296 aa20.46■□□□□ 0.87
EDEM3-206ENST00000474725 ARIH1Q9Y4X5 557 aaPredicted RBP20.46■□□□□ 0.87
EDEM3-206ENST00000474725 FAM237BA0A1B0GVD1 139 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 C2CD4DB7Z1M9 353 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 GOLGA8KD6RF30 607 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 ARNTLO00327 626 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 BNIP3LO60238 219 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 C1QAP02745 245 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 FGF1P05230 155 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 ATP5BP06576 529 aaKnown RBP20.45■□□□□ 0.86
EDEM3-206ENST00000474725 IVLP07476 585 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 NMBRP28336 390 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 SNRPD1P62314 119 aaKnown RBP20.45■□□□□ 0.86
EDEM3-206ENST00000474725 KBTBD12Q3ZCT8 623 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 ANKRD20A4Q4UJ75 823 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 SPANXN3Q5MJ09 141 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 PKN3Q6P5Z2 889 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 PHTF2Q8N3S3 785 aa20.45■□□□□ 0.86
EDEM3-206ENST00000474725 PCDH20Q8N6Y1 951 aaKnown RBP20.45■□□□□ 0.86
EDEM3-206ENST00000474725 PPHLN1Q8NEY8 458 aaKnown RBP20.45■□□□□ 0.86
EDEM3-206ENST00000474725 PDCD6IPQ8WUM4 868 aaKnown RBP20.45■□□□□ 0.86
EDEM3-206ENST00000474725 ZNF669Q96BR6 464 aaPredicted RBP20.45■□□□□ 0.86
EDEM3-206ENST00000474725 CHFRQ96EP1 664 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms