RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TRIM13O60858 407 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 CLDN11O75508 207 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 LYPLA1O75608 230 aaPredicted RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 OLFM2O95897 454 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 KLKB1P03952 638 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 F7P08709 466 aaPredicted RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 RPL17P18621 184 aaKnown RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 LAG3P18627 525 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 CR2P20023 1033 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 ATN1P54259 1190 aaPredicted RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 AQP5P55064 265 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 POU4F1Q01851 419 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 NSUN2Q08J23 767 aaKnown RBP eCLIP9.9□□□□□ -0.82
USP39-214ENST00000474572 CTBP1Q13363 440 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 LAMB3Q13751 1172 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 THOC5Q13769 683 aaKnown RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 USP10Q14694 798 aaKnown RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 PCSK7Q16549 785 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 TSNAXIP1Q2TAA8 658 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 LIPMQ5VYY2 423 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 LRRC8EQ6NSJ5 796 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 NEPROQ6NW34 567 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 ZNF783Q6ZMS7 281 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 MAVSQ7Z434 540 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 SETD3Q86TU7 594 aaPredicted RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 TTC7BQ86TV6 843 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 ALYREFQ86V81 257 aaKnown RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 SLC41A1Q8IVJ1 513 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 OR52K2Q8NGK3 314 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 PPP1R14CQ8TAE6 165 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 ZFRQ96KR1 1074 aaKnown RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 ZNF558Q96NG5 402 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 PSKH2Q96QS6 385 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 MIPEPQ99797 713 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 SEMA3CQ99985 751 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 GATA5Q9BWX5 397 aaPredicted RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 TBC1D10AQ9BXI6 508 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 OXSMQ9NWU1 459 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 TRPM5Q9NZQ8 1165 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 TLK1Q9UKI8 766 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 CORO1CQ9ULV4 474 aaPredicted RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 TBC1D30Q9Y2I9 924 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 ZFP37Q9Y6Q3 630 aaPredicted RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 HELZP42694 1942 aaKnown RBP9.9□□□□□ -0.83
USP39-214ENST00000474572 A0A1B0GVM2 712 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 CCDC78A2IDD5 438 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 TCAF2A6NFQ2 919 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 PHGDHO43175 533 aaKnown RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 UPP2O95045 317 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 KLHL2O95198 593 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 STMN1P16949 149 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 AOC1P19801 751 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 CORO1AP31146 461 aaKnown RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 NUMBP49757 651 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 KPNA2P52292 529 aaKnown RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 TAS2R39P59534 338 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 ZBTB16Q05516 673 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 ITKQ08881 620 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 DLG1Q12959 904 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 SEPT6Q14141 434 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 ZNF235Q14590 738 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 ZNF470Q6ECI4 717 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 RFWD3Q6PCD5 774 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 NAPRTQ6XQN6 538 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 DDX53Q86TM3 631 aaKnown RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 TREML1Q86YW5 311 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 CILP2Q8IUL8 1156 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 CEP97Q8IW35 865 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 FAM217AQ8IXS0 508 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 TCEAL8Q8IYN2 117 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 BBS5Q8N3I7 341 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 FSTL5Q8N475 847 aaPredicted RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.89□□□□□ -0.83
USP39-214ENST00000474572 SLC25A41Q8N5S1 370 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 FAM13CQ8NE31 585 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 OR7D4Q8NG98 312 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 GPR150Q8NGU9 434 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 PPP4R1Q8TF05 950 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 KCTD4Q8WVF5 259 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 SREK1Q8WXA9 508 aaKnown RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 SCG3Q8WXD2 468 aaKnown RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 ZNF512Q96ME7 567 aaPredicted RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 EBF4Q9BQW3 602 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 BTBD10Q9BSF8 475 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 DRC3Q9H069 523 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 CDH19Q9H159 772 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 MMADHCQ9H3L0 296 aaPredicted RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 TASP1Q9H6P5 420 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 MARCOQ9UEW3 520 aaPredicted RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 SEPT3Q9UH03 358 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 AGO1Q9UL18 857 aaKnown RBP9.89□□□□□ -0.83
USP39-214ENST00000474572 ACOT9Q9Y305 439 aa9.89□□□□□ -0.83
USP39-214ENST00000474572 ZNF106Q9H2Y7 1883 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 A0A0D9SEW6 157 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 E2F8A0AVK6 867 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 A8MUI8 341 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 TK2O00142 265 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 AURKAO14965 403 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 GSC2O15499 205 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 GREM1O60565 184 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms