RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 USP29Q9HBJ7 922 aa18.32■□□□□ 0.52
SNRPB-203ENST00000474384 SGK2Q9HBY8 427 aa18.32■□□□□ 0.52
SNRPB-203ENST00000474384 FAM47DPA6NHR8 397 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 LIASO43766 372 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 NBL1P41271 181 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 NEK3P51956 506 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 ETF1P62495 437 aaKnown RBP18.31■□□□□ 0.52
SNRPB-203ENST00000474384 LPAL2Q16609 132 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 PLK5Q496M5 336 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 FBXL19Q6PCT2 694 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 PID1Q7Z2X4 250 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 C11orf74Q86VG3 221 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 VAT1Q99536 393 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 FRMD8P1Q9BZ68 369 aaPredicted RBP18.31■□□□□ 0.52
SNRPB-203ENST00000474384 DUSP15Q9H1R2 295 aaPredicted RBP18.31■□□□□ 0.52
SNRPB-203ENST00000474384 GLOD4Q9HC38 313 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 SMARCAL1Q9NZC9 954 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 KLHL8Q9P2G9 620 aaPredicted RBP18.31■□□□□ 0.52
SNRPB-203ENST00000474384 DKK3Q9UBP4 350 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 TTC7AQ9ULT0 858 aaPredicted RBP18.31■□□□□ 0.52
SNRPB-203ENST00000474384 ANKRD36A6QL64 1941 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 NUMA1Q14980 2115 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 ABCA7Q8IZY2 2146 aa18.31■□□□□ 0.52
SNRPB-203ENST00000474384 CES2O00748 559 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 TRAFD1O14545 582 aaPredicted RBP18.3■□□□□ 0.52
SNRPB-203ENST00000474384 SLC7A4O43246 635 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 SEMA4FO95754 770 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 MMP2P08253 660 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 ADRB3P13945 408 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 TIMP2P16035 220 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 PRLRP16471 622 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 TCP1P17987 556 aaKnown RBP18.3■□□□□ 0.52
SNRPB-203ENST00000474384 NFKB1P19838 968 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 CD68P34810 354 aaPredicted RBP18.3■□□□□ 0.52
SNRPB-203ENST00000474384 CD86P42081 329 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 ADPRHP54922 357 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 TAS2R38P59533 333 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 TRAF2Q12933 501 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 CCNG2Q16589 344 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 LRRC73Q5JTD7 316 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 CFAP58Q5T655 872 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 SYT10Q6XYQ8 523 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 LPCAT2Q7L5N7 544 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 TTC7BQ86TV6 843 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 ZSWIM9Q86XI8 627 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 PAF1Q8N7H5 531 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 FAM71DQ8N9W8 422 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 HCAR2Q8TDS4 363 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 PDCD6IPQ8WUM4 868 aaKnown RBP18.3■□□□□ 0.52
SNRPB-203ENST00000474384 ZC3H10Q96K80 434 aaKnown RBP18.3■□□□□ 0.52
SNRPB-203ENST00000474384 TMEM121Q9BTD3 319 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 SLC25A51Q9H1U9 297 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 EPC1Q9H2F5 836 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 C6orf106Q9H6K1 298 aaPredicted RBP18.3■□□□□ 0.52
SNRPB-203ENST00000474384 TRHDEQ9UKU6 1024 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 RAI2Q9Y5P3 530 aa18.3■□□□□ 0.52
SNRPB-203ENST00000474384 WDR87Q6ZQQ6 2873 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3DA0A087WVF3 549 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3IA0A087WXS9 549 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3EA0A087X179 549 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3KA0A087X1G2 549 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TSPAN11A1L157 253 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3FA6NER0 549 aaPredicted RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 PRR23AA6NEV1 266 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3LB9A6J9 549 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 PGRMC1O00264 195 aaKnown RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 PLRG1O43660 514 aaKnown RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 STK10O94804 968 aaKnown RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 SERPINF2P08697 491 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3HP0C7X1 549 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 ITIH2P19823 946 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 CASQ1P31415 396 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 ABL2P42684 1182 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 SKOR1P84550 965 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 OASLQ15646 514 aaKnown RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 ANKRD20A2Q5SQ80 823 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 ANKRD20A1Q5TYW2 823 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 ANKRD20A3Q5VUR7 823 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 PMS2CLQ68D20 193 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3GQ6DHY5 549 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3CQ6IPX1 549 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 NYAP1Q6ZVC0 841 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 PRPF39Q86UA1 669 aaKnown RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 TBC1D3Q8IZP1 549 aaPredicted RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 ACTRT1Q8TDG2 376 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 NKD2Q969F2 451 aaPredicted RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 ECHDC3Q96DC8 303 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 IMP4Q96G21 291 aaKnown RBP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 RBM15Q96T37 977 aaKnown RBP eCLIP18.29■□□□□ 0.52
SNRPB-203ENST00000474384 ZNF148Q9UQR1 794 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 SAR1BQ9Y6B6 198 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 THADAQ6YHU6 1953 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 FRYLO94915 3013 aa18.29■□□□□ 0.52
SNRPB-203ENST00000474384 LRRC72A6NJI9 287 aa18.28■□□□□ 0.52
SNRPB-203ENST00000474384 F5H423 210 aaPredicted RBP18.28■□□□□ 0.52
SNRPB-203ENST00000474384 HTRA2O43464 458 aaPredicted RBP18.28■□□□□ 0.52
SNRPB-203ENST00000474384 SOCS5O75159 536 aa18.28■□□□□ 0.52
SNRPB-203ENST00000474384 ZNF189O75820 626 aaPredicted RBP18.28■□□□□ 0.52
SNRPB-203ENST00000474384 RHOBTB1O94844 696 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms