RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 MAP6Q96JE9 813 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 FAM111AQ96PZ2 611 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 TMEM237Q96Q45 408 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PPP1R10Q96QC0 940 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 SLC2A13Q96QE2 648 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 SRPK1Q96SB4 655 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 NPY6RQ99463 290 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 C11orf84Q9BUA3 381 aaPredicted RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 B3GNT5Q9BYG0 378 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 WWP1Q9H0M0 922 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 LRRC40Q9H9A6 602 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 KIF9Q9HAQ2 790 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 DMAP1Q9NPF5 467 aaPredicted RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 ARHGEF4Q9NR80 690 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 DDIT4Q9NX09 232 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PRR13Q9NZ81 148 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 DTLQ9NZJ0 730 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 COX16Q9P0S2 106 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 DCDC2Q9UHG0 476 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 ZMYM5Q9UJ78 669 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 ADAM28Q9UKQ2 775 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 GRID1Q9ULK0 1009 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 TTLL3Q9Y4R7 772 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PCDHB12Q9Y5F1 795 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PCDHGB7Q9Y5F8 929 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CITO14578 2027 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 KAT6AQ92794 2004 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 A0A0G2JND7 137 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 WDR91A4D1P6 747 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 TCAF2A6NFQ2 919 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 FAM159BA6NKW6 160 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 NOTOA8MTQ0 251 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 C9IYK1 514 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 GABRDO14764 452 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 MFSD11O43934 449 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 CABYRO75952 493 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ANXA9O76027 345 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 RECKO95980 971 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 APOA4P06727 396 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ACRP10323 421 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 FGFR1P11362 822 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 CCNB1P14635 433 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 IL4RP24394 825 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ACAT1P24752 427 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 LMO2P25791 158 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 CFPP27918 469 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 TKTP29401 623 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 CRHR1P34998 444 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 SPRP35270 261 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ADRA1BP35368 520 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 MLH1P40692 756 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 NPY2RP49146 381 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 SERPINB8P50452 374 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 NEK3P51956 506 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 KPNA2P52292 529 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 GJA9P57773 515 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 SESN2P58004 480 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 DAOAP59103 153 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ADAM17P78536 824 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF33AQ06730 810 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 MGAT5Q09328 741 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ASPHQ12797 758 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 GALNTL6Q49A17 601 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 SYCP2LQ5T4T6 812 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ARMC3Q5W041 872 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 BSPRYQ5W0U4 402 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 STEAP4Q687X5 459 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 TIGD7Q6NT04 549 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 RGMBQ6NW40 437 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 TIFABQ6ZNK6 161 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 CLEC20AQ6ZU45 233 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 OTOAQ7RTW8 1153 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 RPAINQ86UA6 219 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 CAND1Q86VP6 1230 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 FAM228AQ86W67 206 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 OSTM1Q86WC4 334 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 RASAL3Q86YV0 1011 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 C1QL4Q86Z23 238 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 WDR75Q8IWA0 830 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 LRRC56Q8IYG6 542 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 DCP1BQ8IZD4 617 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 NDUFAF2Q8N183 169 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 SCML4Q8N228 414 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ARHGAP18Q8N392 663 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 LZTR1Q8N653 840 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 DNAAF3Q8N9W5 541 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 PCSK9Q8NBP7 692 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 RNF169Q8NCN4 708 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 SMC1BQ8NDV3 1235 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 URGCPQ8TCY9 931 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 CLEC4CQ8WTT0 213 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 MCUR1Q96AQ8 359 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 E2F7Q96AV8 911 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 P2RY11Q96G91 374 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 RSRC1Q96IZ7 334 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 DHRS1Q96LJ7 313 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 C7orf26Q96N11 449 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 ANKRD27Q96NW4 1050 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 OLFM3Q96PB7 478 aa5.99□□□□□ -1.45
ATPAF1-204ENST00000474020 FERD3LQ96RJ6 166 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms