RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 MKS1Q9NXB0 559 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 EMCNQ9ULC0 261 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 SH3BP1Q9Y3L3 701 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 OR51B4Q9Y5P0 310 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 AURKAO14965 403 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 BGNP21810 368 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 CDK18Q07002 472 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 CDH18Q13634 790 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 CES4AQ5XG92 561 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 RGS9BPQ6ZS82 235 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 HTR3DQ70Z44 454 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 APCDD1Q8J025 514 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 CCDC197Q8NCU1 140 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 ALG14Q96F25 216 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 VPS39Q96JC1 886 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 CABS1Q96KC9 395 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 GCNAQ96QF7 691 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 PITPNM3Q9BZ71 974 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 MRM3Q9HC36 420 aaKnown RBP18.18■□□□□ 0.5
VARS2-206ENST00000473916 VPS51Q9UID3 782 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 VPS28Q9UK41 221 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 LSM7Q9UK45 103 aaKnown RBP18.18■□□□□ 0.5
VARS2-206ENST00000473916 PHTF1Q9UMS5 762 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 CHKBQ9Y259 395 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 TMCC1O94876 653 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 MT-CO1P00395 513 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 SERPINF2P08697 491 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 BMP1P13497 986 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 CR2P20023 1033 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 CRHR1P34998 444 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 SLC1A2P43004 574 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 ARSDP51689 593 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 GRM3Q14832 879 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 TSTD2Q5T7W7 516 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 MFSD6LQ8IWD5 586 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 PTCD2Q8WV60 388 aaKnown RBP18.17■□□□□ 0.5
VARS2-206ENST00000473916 IFT43Q96FT9 208 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 TRIB3Q96RU7 358 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 CERS4Q9HA82 394 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 FCF1Q9Y324 198 aaKnown RBP18.17■□□□□ 0.5
VARS2-206ENST00000473916 ARL5AQ9Y689 179 aa18.17■□□□□ 0.5
VARS2-206ENST00000473916 CCDC195A0A1B0GUA6 201 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 HEATR9A2RTY3 570 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 K7ERQ8 282 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 CLASP2O75122 1294 aaKnown RBP18.16■□□□□ 0.5
VARS2-206ENST00000473916 AHSGP02765 367 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 RHOP08100 348 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 TYK2P29597 1187 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 SPRP35270 261 aaPredicted RBP18.16■□□□□ 0.5
VARS2-206ENST00000473916 IRF9Q00978 393 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 SPRED3Q2MJR0 410 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 RBM23Q86U06 439 aaKnown RBP18.16■□□□□ 0.5
VARS2-206ENST00000473916 ZC3HC1Q86WB0 502 aaKnown RBP18.16■□□□□ 0.5
VARS2-206ENST00000473916 MFN1Q8IWA4 741 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 PLD6Q8N2A8 252 aaKnown RBP18.16■□□□□ 0.5
VARS2-206ENST00000473916 BLOC1S5Q8TDH9 187 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 SH3RF2Q8TEC5 729 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 FEM1CQ96JP0 617 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 VPS11Q9H270 941 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 HCFC2Q9Y5Z7 792 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 MROH6A6NGR9 719 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 OR51F1A6NGY5 319 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 C5orf67F2Z3F1 127 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 LDB2O43679 373 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 EDF1O60869 148 aaKnown RBP18.16■□□□□ 0.5
VARS2-206ENST00000473916 PDHA1P08559 390 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 PTPRRQ15256 657 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 ZNF789Q5FWF6 425 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 N4BP2L1Q5TBK1 243 aaPredicted RBP18.16■□□□□ 0.5
VARS2-206ENST00000473916 ZNF470Q6ECI4 717 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 KIAA0930Q6ICG6 404 aaPredicted RBP18.16■□□□□ 0.5
VARS2-206ENST00000473916 OTOAQ7RTW8 1153 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 SPATA21Q7Z572 469 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 CNTN4Q8IWV2 1026 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 CCDC63Q8NA47 563 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 MANSC1Q9H8J5 431 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 PCDHGC4Q9Y5F7 938 aa18.16■□□□□ 0.5
VARS2-206ENST00000473916 INSIG1O15503 277 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 PRAMEF12O95522 483 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 GSRP00390 522 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 SAT1P21673 171 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 MAGEA12P43365 314 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 CSE1LP55060 971 aaKnown RBP18.15■□□□□ 0.5
VARS2-206ENST00000473916 TMPRSS15P98073 1019 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 OVGP1Q12889 678 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 ATXN7L2Q5T6C5 722 aaPredicted RBP18.15■□□□□ 0.5
VARS2-206ENST00000473916 ADGRD2Q7Z7M1 963 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 BBS5Q8N3I7 341 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 RANBP9Q96S59 729 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 LBHD1Q9BQE6 289 aaPredicted RBP18.15■□□□□ 0.5
VARS2-206ENST00000473916 SCUBE2Q9NQ36 999 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 LHX3Q9UBR4 397 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 PRDM4Q9UKN5 801 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 SLC39A10Q9ULF5 831 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 USP15Q9Y4E8 981 aaPredicted RBP18.15■□□□□ 0.5
VARS2-206ENST00000473916 SPO11Q9Y5K1 396 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 TYW5A2RUC4 315 aaKnown RBP18.15■□□□□ 0.5
VARS2-206ENST00000473916 PRLP01236 227 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 EPHA5P54756 1037 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 RFTN1Q14699 578 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms