RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 EPHB6O15197 1021 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 PI15O43692 258 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 SPAG6O75602 509 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 IFNA14P01570 189 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 MTHFD1P11586 935 aaKnown RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ACAT1P24752 427 aaKnown RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 HOXA7P31268 230 aaPredicted RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TALDO1P37837 337 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 NDST2P52849 883 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 PRAMEP78395 509 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 KRT17Q04695 432 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 GRSF1Q12849 480 aaKnown RBP eCLIP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 BNIP3Q12983 259 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TCIRG1Q13488 830 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 HERC3Q15034 1050 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 MAPRE1Q15691 268 aaKnown RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 AARS2Q5JTZ9 985 aaKnown RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 UBAP2Q5T6F2 1119 aaKnown RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 PXDC1Q5TGL8 231 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 UBE2UQ5VVX9 321 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 GALNT18Q6P9A2 607 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 KBTBD6Q86V97 674 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 NGDNQ8NEJ9 315 aaKnown RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 CDC26Q8NHZ8 85 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 JPH3Q8WXH2 748 aaPredicted RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 SGK3Q96BR1 496 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 MFSD14AQ96MC6 490 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ZFYVE21Q9BQ24 234 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 VPS11Q9H270 941 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 CXorf21Q9HAI6 301 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TIGARQ9NQ88 270 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 BABAM1Q9NWV8 329 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 DBNLQ9UJU6 430 aaKnown RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 GMEB2Q9UKD1 530 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 SF3B1O75533 1304 aaKnown RBP eCLIP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TRAV6A0A075B6T7 132 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 A0A087X0T9 212 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 C1orf232A0A0U1RR37 186 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 A0A1W2PQ72 361 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 PI4K2BG5E9Z4 385 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 FOXN3O00409 490 aaPredicted RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 MAFO75444 373 aaPredicted RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF205O95201 554 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ECDO95905 644 aaPredicted RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 BCL10O95999 233 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 PGK2P07205 417 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 JMJD7P0C870 316 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 SSTP61278 116 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 CYP4F2P78329 520 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 NFATC3Q12968 1075 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 DHCR24Q15392 516 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TAF5Q15542 800 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 DLG2Q15700 870 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 FAM47CQ5HY64 1035 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 C12orf60Q5U649 245 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 PGM2L1Q6PCE3 622 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 SYCE2Q6PIF2 218 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TSPYL5Q86VY4 417 aaPredicted RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 HPS6Q86YV9 775 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 KSR1Q8IVT5 923 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 CCDC103Q8IW40 242 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 CCDC105Q8IYK2 499 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC25A41Q8N5S1 370 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ENKURQ8TC29 256 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 FANK1Q8TC84 345 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TANKQ92844 425 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 CELF1Q92879 486 aaKnown RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 SH3KBP1Q96B97 665 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ERLEC1Q96DZ1 483 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 APOPT1Q96IL0 206 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 CLPTM1LQ96KA5 538 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 CAMKK2Q96RR4 588 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TUBA1CQ9BQE3 449 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 OSBPL11Q9BXB4 747 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ABCG4Q9H172 646 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TRABDQ9H4I3 376 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 NARFLQ9H6Q4 476 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 FANCFQ9NPI8 374 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 FBXO6Q9NRD1 293 aaPredicted RBP5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 GPATCH2Q9NW75 528 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 NPAP1Q9NZP6 1156 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 MBD2Q9UBB5 411 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC45A1Q9Y2W3 748 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF175Q9Y473 711 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 PCDHA9Q9Y5H5 950 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 TIAM2Q8IVF5 1701 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 ARHGAP42A6NI28 874 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 LRRC72A6NJI9 287 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 OR6C65A6NJZ3 312 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 THAP12O43422 761 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 IFNA16P05015 189 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 F13BP05160 661 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 ENO1P06733 434 aaKnown RBP5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 DLDP09622 509 aaKnown RBP5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 MCF2P10911 925 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 DBTP11182 482 aaKnown RBP5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 KRT13P13646 458 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 CCNA2P20248 432 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 CYP3A5P20815 502 aa5.19□□□□□ -1.58
TMEM39A-206ENST00000473684 CA4P22748 312 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms