RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 LZTS3O60299 673 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SRGAP2O75044 1071 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 DAB1O75553 588 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 WISP1O95388 367 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 FGFR1OPO95684 399 aaKnown RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 F9P00740 461 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ITGB7P26010 798 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 VARSP26640 1264 aaKnown RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 L1CAMP32004 1257 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 NOP2P46087 812 aaKnown RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SULT1E1P49888 294 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 RNASE9P60153 205 aaKnown RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SLC6A3Q01959 620 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 PTK2Q05397 1052 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 DEUP1Q05D60 604 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SPIDRQ14159 915 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 C5orf22Q49AR2 442 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ALFQ53S48 1182 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 PRRT3Q5FWE3 981 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 DESI1Q6ICB0 168 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ESRP1Q6NXG1 681 aaKnown RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 DPY19L3Q6ZPD9 716 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 FAM183BPQ6ZVS7 135 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 C14orf80Q86SX3 495 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ZDHHC17Q8IUH5 632 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 TRIM59Q8IWR1 403 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 PCDH20Q8N6Y1 951 aaKnown RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 WDR36Q8NI36 951 aaKnown RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SPATA20Q8TB22 786 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 NELFBQ8WX92 580 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 NAT6Q93015 286 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ARHGEF26Q96DR7 871 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 LENG8Q96PV6 779 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 CCNL2Q96S94 520 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 PSMB7Q99436 277 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 CCDC3Q9BQI4 270 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 HEPHQ9BQS7 1158 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SLC13A1Q9BZW2 595 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 CEP44Q9C0F1 390 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ZDHHC6Q9H6R6 413 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 CAAP1Q9H8G2 361 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ATP13A1Q9HD20 1204 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 PIGVQ9NUD9 493 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SPASTQ9UBP0 616 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 APOBEC3BQ9UH17 382 aaKnown RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 CTNND2Q9UQB3 1225 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ZDHHC9Q9Y397 364 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ENTPD2Q9Y5L3 495 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 FADS3Q9Y5Q0 445 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 TP53BP1Q12888 1972 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SHROOM3Q8TF72 1996 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 CCDC187A0A096LP49 1063 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 LY6G6EA0A0G2JKS1 128 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 IGLON5A6NGN9 336 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 ERICH4A6NGS2 130 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 CDRT15L2A8MXV6 281 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 RNF103O00237 685 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 RAD51BO15315 384 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 TSPAN6O43657 245 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 AP1G1O43747 822 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 GJB6O95452 261 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 ERBB2P04626 1255 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 ANXA6P08133 673 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 ITGA2BP08514 1039 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 SERPINH1P50454 418 aaKnown RBP7.03□□□□□ -1.28
CKS1B-205ENST00000473344 CCNHP51946 323 aaPredicted RBP7.03□□□□□ -1.28
CKS1B-205ENST00000473344 ADKP55263 362 aaKnown RBP7.03□□□□□ -1.28
CKS1B-205ENST00000473344 STX17P56962 302 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 SH3BP2P78314 561 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 NFATC3Q12968 1075 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 PAK1Q13153 545 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 CLN3Q13286 438 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 C1orf61Q13536 156 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 DRAP1Q14919 205 aaPredicted RBP7.03□□□□□ -1.28
CKS1B-205ENST00000473344 POLD3Q15054 466 aaPredicted RBP7.03□□□□□ -1.28
CKS1B-205ENST00000473344 ZSCAN26Q16670 478 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 CARD16Q5EG05 197 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 FAXCQ5TGI0 409 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 TTI2Q6NXR4 508 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 TRIM65Q6PJ69 517 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 OLFML1Q6UWY5 402 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 ZNF783Q6ZMS7 281 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 USP53Q70EK8 1073 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 PARS2Q7L3T8 475 aaKnown RBP7.03□□□□□ -1.28
CKS1B-205ENST00000473344 SLC26A9Q7LBE3 791 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 TRIM46Q7Z4K8 759 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 JAMLQ86YT9 394 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 WDTC1Q8N5D0 677 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 C1orf131Q8NDD1 294 aaKnown RBP7.03□□□□□ -1.28
CKS1B-205ENST00000473344 DENND6BQ8NEG7 585 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 OR7D4Q8NG98 312 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 SCG3Q8WXD2 468 aaKnown RBP7.03□□□□□ -1.28
CKS1B-205ENST00000473344 RAB7BQ96AH8 199 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 C1orf74Q96LT6 269 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 CRACR2AQ9BSW2 395 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 C1QTNF7Q9BXJ2 289 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 TM6SF2Q9BZW4 377 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 ZYG11BQ9C0D3 744 aa7.03□□□□□ -1.28
CKS1B-205ENST00000473344 STRADBQ9C0K7 418 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms