RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 STMN1P16949 149 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 KCNA5P22460 613 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 AIF1P55008 147 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 CYTH1Q15438 398 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 DENND5AQ6IQ26 1287 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 CNSTQ6PJW8 725 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 CEP70Q8NHQ1 597 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 SCAMP5Q8TAC9 235 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 STON2Q8WXE9 905 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 MAELQ96JY0 434 aaKnown RBP21.31■■□□□ 1
COL18A1-207ENST00000473212 C7orf72A4D263 438 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 E7ENX8 843 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 TMCC1O94876 653 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 PSMC3P17980 439 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 SLC1A2P43004 574 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 TAS2R39P59534 338 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 USP46P62068 366 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 PDAP1Q13442 181 aaKnown RBP21.31■■□□□ 1
COL18A1-207ENST00000473212 USP41Q3LFD5 358 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 TMEM259Q4ZIN3 620 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 PKN3Q6P5Z2 889 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 LCA5Q86VQ0 697 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 RNF135Q8IUD6 432 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 HASPINQ8TF76 798 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 BRI3BPQ8WY22 251 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 ASB9Q96DX5 294 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 MS4A4AQ96JQ5 239 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 VAT1Q99536 393 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 OSBPL2Q9H1P3 480 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 POMKQ9H5K3 350 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 COQ10BQ9H8M1 238 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 CCL15-CCL14A0A0B4J2E2 113 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 TRPC5OSA6NMA1 111 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 MSI1O43347 362 aaKnown RBP21.3■■□□□ 1
COL18A1-207ENST00000473212 HNRNPRO43390 633 aaKnown RBP21.3■■□□□ 1
COL18A1-207ENST00000473212 PYGLP06737 847 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 FGFR3P22607 806 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 PCSK6P29122 969 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 PLK1P53350 603 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 CCL15Q16663 113 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 ARL13BQ3SXY8 428 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 INTS6LQ5JSJ4 861 aaKnown RBP21.3■■□□□ 1
COL18A1-207ENST00000473212 RBM20Q5T481 1227 aaKnown RBP21.3■■□□□ 1
COL18A1-207ENST00000473212 IL31Q6EBC2 164 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 TRIM67Q6ZTA4 783 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 DDI1Q8WTU0 396 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 LRTOMTQ8WZ04 291 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 ELMO2Q96JJ3 720 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 TMEM209Q96SK2 561 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 MRPL46Q9H2W6 279 aaKnown RBP21.3■■□□□ 1
COL18A1-207ENST00000473212 TRPC7Q9HCX4 862 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 CNGB3Q9NQW8 809 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 NCKIPSDQ9NZQ3 722 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 FLRT1Q9NZU1 646 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 NEU3Q9UQ49 428 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 AP4S1Q9Y587 144 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 H3BSA7 217 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 MT-CO1P00395 513 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 BDNFP23560 247 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 LRPAP1P30533 357 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 CXCR3P49682 368 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 RALGDSQ12967 914 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 TRIM25Q14258 630 aaKnown RBP21.3■■□□□ 1
COL18A1-207ENST00000473212 GRB14Q14449 540 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 UGP2Q16851 508 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 RAB41Q5JT25 222 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 PCID2Q5JVF3 399 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 LINC00523Q86TU6 105 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 RNF11Q9Y3C5 154 aa21.3■■□□□ 1
COL18A1-207ENST00000473212 NPHS1O60500 1241 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 HSPA1AP0DMV8 641 aaKnown RBP21.29■■□□□ 1
COL18A1-207ENST00000473212 HSPA1BP0DMV9 641 aaKnown RBP21.29■■□□□ 1
COL18A1-207ENST00000473212 ARCN1P48444 511 aaKnown RBP21.29■■□□□ 1
COL18A1-207ENST00000473212 NR1H2P55055 460 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 TLK2Q86UE8 772 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 ARHGAP12Q8IWW6 846 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 PELI3Q8N2H9 469 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 HMGCLL1Q8TB92 370 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 HEXDCQ8WVB3 486 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 CHST12Q9NRB3 414 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 TMLHEQ9NVH6 421 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 CCL22O00626 93 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 MYL3P08590 195 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 NELFEP18615 380 aaKnown RBP21.29■■□□□ 1
COL18A1-207ENST00000473212 PPP1R3AQ16821 1122 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 LDLRAD1Q5T700 205 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 IQSEC1Q6DN90 963 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 ZNF470Q6ECI4 717 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 ZNF467Q7Z7K2 595 aaPredicted RBP21.29■■□□□ 1
COL18A1-207ENST00000473212 CHERPQ8IWX8 916 aaKnown RBP21.29■■□□□ 1
COL18A1-207ENST00000473212 MYLPFQ96A32 169 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 TBL1YQ9BQ87 522 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 PREBQ9HCU5 417 aa21.29■■□□□ 1
COL18A1-207ENST00000473212 UTP6Q9NYH9 597 aaKnown RBP21.29■■□□□ 1
COL18A1-207ENST00000473212 CNOT11Q9UKZ1 510 aaKnown RBP21.29■■□□□ 1
COL18A1-207ENST00000473212 ARHGAP10A1A4S6 786 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 AXLP30530 894 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 CLCN2P51788 898 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 CREB5Q02930 508 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 SULT2A1Q06520 285 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms