RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LYSMD4Q5XG99 296 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 DSG4Q86SJ6 1040 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 RFX6Q8HWS3 928 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 RYBPQ8N488 228 aaPredicted RBP13.28□□□□□ -0.28
TPM3-216ENST00000473036 ATPAF2Q8N5M1 289 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 TEX26Q8N6G2 289 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 EXD1Q8NHP7 514 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 GANCQ8TET4 914 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 PIGKQ92643 395 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 GDAP1L1Q96MZ0 367 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 KLHL32Q96NJ5 620 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 ZNF599Q96NL3 588 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 TSGA13Q96PP4 275 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 PSKH2Q96QS6 385 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 LGMNQ99538 433 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 HDAC8Q9BY41 377 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 GGT7Q9UJ14 662 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.28□□□□□ -0.28
TPM3-216ENST00000473036 HEY1Q9Y5J3 304 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 DSPP15924 2871 aaKnown RBP13.27□□□□□ -0.28
TPM3-216ENST00000473036 FASNP49327 2511 aaKnown RBP13.27□□□□□ -0.29
TPM3-216ENST00000473036 C16orf96A6NNT2 1141 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 UPK3BL1B0FP48 263 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 UPK3BL2E5RIL1 263 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 C1QTNF3-AMACRE9PGA6 284 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 APOL1O14791 398 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 CST8O60676 142 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 ZRANB2O95218 330 aaKnown RBP eCLIP13.27□□□□□ -0.29
TPM3-216ENST00000473036 POP4O95707 220 aaKnown RBP13.27□□□□□ -0.29
TPM3-216ENST00000473036 IGSF6O95976 241 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 TIMP2P16035 220 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 ITGB7P26010 798 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 RECQLP46063 649 aaPredicted RBP13.27□□□□□ -0.29
TPM3-216ENST00000473036 CSNK1DP48730 415 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 MAXP61244 160 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 BNC1Q01954 994 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 RFTN1Q14699 578 aaPredicted RBP13.27□□□□□ -0.29
TPM3-216ENST00000473036 TMCO4Q5TGY1 634 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 KAZNQ674X7 775 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 GDPD4Q6W3E5 623 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 ERN2Q76MJ5 926 aaKnown RBP13.27□□□□□ -0.29
TPM3-216ENST00000473036 CYP2U1Q7Z449 544 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 SRLQ86TD4 932 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 CAMK1DQ8IU85 385 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 RCOR2Q8IZ40 523 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 SYCE1Q8N0S2 351 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 OR2T34Q8NGX1 318 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 OR14C36Q8NHC7 312 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 GATA6Q92908 595 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 HES6Q96HZ4 224 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 CCDC114Q96M63 670 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 MGME1Q9BQP7 344 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 HEMGNQ9BXL5 484 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 EIF2B4Q9UI10 523 aaKnown RBP13.27□□□□□ -0.29
TPM3-216ENST00000473036 GUCA1BQ9UMX6 200 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 ZFR2Q9UPR6 939 aaKnown RBP13.27□□□□□ -0.29
TPM3-216ENST00000473036 ITM2BQ9Y287 266 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 NCKAP1Q9Y2A7 1128 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 NEUROG3Q9Y4Z2 214 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 DMXL2Q8TDJ6 3036 aa13.27□□□□□ -0.29
TPM3-216ENST00000473036 KIF2AO00139 706 aaPredicted RBP13.26□□□□□ -0.29
TPM3-216ENST00000473036 TRAFD1O14545 582 aaPredicted RBP13.26□□□□□ -0.29
TPM3-216ENST00000473036 MATN3O15232 486 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 KIF5CO60282 957 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 FSBPO95073 299 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 ADRB3P13945 408 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 CCNCP24863 283 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 HOXD12P35452 270 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 PPIDQ08752 370 aaKnown RBP13.26□□□□□ -0.29
TPM3-216ENST00000473036 NSUN2Q08J23 767 aaKnown RBP eCLIP13.26□□□□□ -0.29
TPM3-216ENST00000473036 TP53BP1Q12888 1972 aaPredicted RBP13.26□□□□□ -0.29
TPM3-216ENST00000473036 FOXC1Q12948 553 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 ZBTB17Q13105 803 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 ZNF211Q13398 564 aaPredicted RBP13.26□□□□□ -0.29
TPM3-216ENST00000473036 FGL2Q14314 439 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 ZNF805Q5CZA5 627 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 TFDP3Q5H9I0 405 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 KIAA0895LQ68EN5 471 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 CNTD1Q8N815 330 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 FATE1Q969F0 183 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 HAUS1Q96CS2 278 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 HDAC11Q96DB2 347 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 LRIG1Q96JA1 1093 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 ALS2CR12Q96Q35 445 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 CINPQ9BW66 212 aaPredicted RBP13.26□□□□□ -0.29
TPM3-216ENST00000473036 CPEB1Q9BZB8 566 aaKnown RBP13.26□□□□□ -0.29
TPM3-216ENST00000473036 SLC32A1Q9H598 525 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 NOD2Q9HC29 1040 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 LZTFL1Q9NQ48 299 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 SEPT3Q9UH03 358 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 AMFRQ9UKV5 643 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
TPM3-216ENST00000473036 FADS3Q9Y5Q0 445 aa13.26□□□□□ -0.29
TPM3-216ENST00000473036 TMEM131Q92545 1883 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 CCDC66A2RUB6 948 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 KCNK1O00180 336 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 CDX4O14627 284 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms