RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CALCOCO2Q13137 446 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 PCSK7Q16549 785 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 ZNF805Q5CZA5 627 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 CWF19L1Q69YN2 538 aaKnown RBP17.03■□□□□ 0.32
CCM2-205ENST00000472223 KIAA1211LQ6NV74 962 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 KIAA1324Q6UXG2 1013 aaKnown RBP17.03■□□□□ 0.32
CCM2-205ENST00000472223 LINC00523Q86TU6 105 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 FBXL6Q8N531 539 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 CAMKK1Q8N5S9 505 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 SPATA22Q8NHS9 363 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 ARRDC2Q8TBH0 407 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 HCAR2Q8TDS4 363 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 ERLEC1Q96DZ1 483 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 KLHL32Q96NJ5 620 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 OMDQ99983 421 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 LRRC40Q9H9A6 602 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 ETNK1Q9HBU6 452 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 UBP1Q9NZI7 540 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 PPM1HQ9ULR3 514 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 PCDHGC4Q9Y5F7 938 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 RAI2Q9Y5P3 530 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 CKAP5Q14008 2032 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 BDP1A6H8Y1 2624 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.02■□□□□ 0.32
CCM2-205ENST00000472223 AP3B1O00203 1094 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 RAD51CO43502 376 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 LAMTOR5O43504 91 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 PIGNO95427 931 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 METTL18O95568 372 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 APBB3O95704 486 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 MT-CYBP00156 380 aaPredicted RBP17.02■□□□□ 0.32
CCM2-205ENST00000472223 APRTP07741 180 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 SLC8A1P32418 973 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 SKOR1P84550 965 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 CDK18Q07002 472 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 CST6Q15828 149 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 NAPEPLDQ6IQ20 393 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 PKN3Q6P5Z2 889 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 FBXL19Q6PCT2 694 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 BRAT1Q6PJG6 821 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 TMEM92Q6UXU6 159 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 MAMSTRQ6ZN01 415 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 PRUNE1Q86TP1 453 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 CAMK1DQ8IU85 385 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 IPMKQ8NFU5 416 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 HMGB4Q8WW32 186 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 RMDN1Q96DB5 314 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 FAM129BQ96TA1 746 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 TPX2Q9ULW0 747 aaKnown RBP17.02■□□□□ 0.32
CCM2-205ENST00000472223 WASF2Q9Y6W5 498 aa17.02■□□□□ 0.32
CCM2-205ENST00000472223 ANKRD36A6QL64 1941 aa17.02■□□□□ 0.31
CCM2-205ENST00000472223 SMAPO00193 183 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 PI15O43692 258 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 EPOP01588 193 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 COL9A1P20849 921 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 GKP32189 559 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 WNT3AP56704 352 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 RPL26P61254 145 aaKnown RBP17.01■□□□□ 0.31
CCM2-205ENST00000472223 RPS14P62263 151 aaKnown RBP17.01■□□□□ 0.31
CCM2-205ENST00000472223 CDK16Q00536 496 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 SEMA5AQ13591 1074 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 FAXCQ5TGI0 409 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 PPP1R21Q6ZMI0 780 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 KDELC2Q7Z4H8 507 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 TTC7BQ86TV6 843 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 PRPF39Q86UA1 669 aaKnown RBP17.01■□□□□ 0.31
CCM2-205ENST00000472223 KBTBD6Q86V97 674 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 PDCD7Q8N8D1 485 aaKnown RBP17.01■□□□□ 0.31
CCM2-205ENST00000472223 GLIS1Q8NBF1 620 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 SNF8Q96H20 258 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 ZNF419Q96HQ0 510 aaPredicted RBP17.01■□□□□ 0.31
CCM2-205ENST00000472223 FEM1CQ96JP0 617 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 SRPK1Q96SB4 655 aaKnown RBP17.01■□□□□ 0.31
CCM2-205ENST00000472223 ERP44Q9BS26 406 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 LRRC1Q9BTT6 524 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 TRIM31Q9BZY9 425 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 PHTF1Q9UMS5 762 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 RPL26L1Q9UNX3 145 aaKnown RBP17.01■□□□□ 0.31
CCM2-205ENST00000472223 PCDHB9Q9Y5E1 797 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 TRIOO75962 3097 aa17.01■□□□□ 0.31
CCM2-205ENST00000472223 TECTAO75443 2155 aa17■□□□□ 0.31
CCM2-205ENST00000472223 CPP00450 1065 aa17■□□□□ 0.31
CCM2-205ENST00000472223 MMP2P08253 660 aa17■□□□□ 0.31
CCM2-205ENST00000472223 CHRM1P11229 460 aaPredicted RBP17■□□□□ 0.31
CCM2-205ENST00000472223 ITIH2P19823 946 aa17■□□□□ 0.31
CCM2-205ENST00000472223 ITGB7P26010 798 aa17■□□□□ 0.31
CCM2-205ENST00000472223 SUOXP51687 545 aa17■□□□□ 0.31
CCM2-205ENST00000472223 COPAP53621 1224 aa17■□□□□ 0.31
CCM2-205ENST00000472223 TERF1P54274 439 aa17■□□□□ 0.31
CCM2-205ENST00000472223 GAS6Q14393 721 aa17■□□□□ 0.31
CCM2-205ENST00000472223 ANO7Q6IWH7 933 aa17■□□□□ 0.31
CCM2-205ENST00000472223 ERAP2Q6P179 960 aa17■□□□□ 0.31
CCM2-205ENST00000472223 CACUL1Q86Y37 369 aa17■□□□□ 0.31
CCM2-205ENST00000472223 PPIL6Q8IXY8 311 aa17■□□□□ 0.31
CCM2-205ENST00000472223 HDDC3Q8N4P3 179 aa17■□□□□ 0.31
CCM2-205ENST00000472223 DNAAF3Q8N9W5 541 aa17■□□□□ 0.31
CCM2-205ENST00000472223 MRGPRX1Q96LB2 322 aa17■□□□□ 0.31
CCM2-205ENST00000472223 HHIPQ96QV1 700 aa17■□□□□ 0.31
CCM2-205ENST00000472223 TBL1YQ9BQ87 522 aa17■□□□□ 0.31
CCM2-205ENST00000472223 TRIM51Q9BSJ1 452 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms