RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
CDHR3-209ENST00000472116 DQX1Q8TE96 717 aaKnown RBP10.39□□□□□ -0.75
CDHR3-209ENST00000472116 RPRD1AQ96P16 312 aaPredicted RBP10.39□□□□□ -0.75
CDHR3-209ENST00000472116 ZPBPQ9BS86 351 aa10.39□□□□□ -0.75
CDHR3-209ENST00000472116 BACH2Q9BYV9 841 aa10.39□□□□□ -0.75
CDHR3-209ENST00000472116 TNMDQ9H2S6 317 aa10.39□□□□□ -0.75
CDHR3-209ENST00000472116 DPEP2Q9H4A9 486 aa10.39□□□□□ -0.75
CDHR3-209ENST00000472116 RRN3Q9NYV6 651 aa10.39□□□□□ -0.75
CDHR3-209ENST00000472116 KLQ9UEF7 1012 aa10.39□□□□□ -0.75
CDHR3-209ENST00000472116 PNMA8BQ9ULN7 279 aaPredicted RBP10.39□□□□□ -0.75
CDHR3-209ENST00000472116 PCSK5Q92824 1860 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 B4E171 279 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 TM7SF2O76062 418 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 SORBS2O94875 1100 aaKnown RBP10.38□□□□□ -0.75
CDHR3-209ENST00000472116 CD19P15391 556 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 GJB2P29033 226 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 TSPAN7P41732 249 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 DNA2P51530 1060 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 LIMK2P53671 638 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 RAD23BP54727 409 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 OR1D5P58170 312 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 SRP54P61011 504 aaKnown RBP10.38□□□□□ -0.75
CDHR3-209ENST00000472116 B4GALNT1Q00973 533 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 HLTFQ14527 1009 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDHR3-209ENST00000472116 KNOP1Q1ED39 458 aaKnown RBP10.38□□□□□ -0.75
CDHR3-209ENST00000472116 ALG11Q2TAA5 492 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 C22orf39Q6P5X5 142 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 UBA3Q8TBC4 463 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 FAM149B1Q96BN6 582 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 CENPTQ96BT3 561 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 SLC39A13Q96H72 371 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 DPYSL5Q9BPU6 564 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 NUDT22Q9BRQ3 303 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 SLC25A23Q9BV35 468 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 TRIM62Q9BVG3 475 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 PANK2Q9BZ23 570 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 TNKS2Q9H2K2 1166 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 APOBEC3GQ9HC16 384 aaKnown RBP10.38□□□□□ -0.75
CDHR3-209ENST00000472116 CISHQ9NSE2 258 aa10.38□□□□□ -0.75
CDHR3-209ENST00000472116 XPO7Q9UIA9 1087 aaKnown RBP10.38□□□□□ -0.75
CDHR3-209ENST00000472116 G3BP2Q9UN86 482 aaKnown RBP10.38□□□□□ -0.75
CDHR3-209ENST00000472116 CDC14CA4D256 554 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 PIK3R2O00459 728 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 STK17BO94768 372 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 FBXO21O94952 628 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 PDGFAP04085 211 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 RRM1P23921 792 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 DLSTP36957 453 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 RGS7P49802 495 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 NFATC4Q14934 902 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 NR6A1Q15406 480 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 ZC3H12AQ5D1E8 599 aaKnown RBP10.37□□□□□ -0.75
CDHR3-209ENST00000472116 SP5Q6BEB4 398 aaPredicted RBP10.37□□□□□ -0.75
CDHR3-209ENST00000472116 OGFOD3Q6PK18 319 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 DPY19L3Q6ZPD9 716 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 PARS2Q7L3T8 475 aaKnown RBP10.37□□□□□ -0.75
CDHR3-209ENST00000472116 OR4D9Q8NGE8 314 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 CXorf40AQ8TE69 158 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 RTP4Q96DX8 246 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 ALG14Q96F25 216 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 FAXDC2Q96IV6 333 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 LURAP1Q96LR2 239 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 RBM15Q96T37 977 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDHR3-209ENST00000472116 HEPHQ9BQS7 1158 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 MMRN2Q9H8L6 949 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 MRPL40Q9NQ50 206 aaKnown RBP10.37□□□□□ -0.75
CDHR3-209ENST00000472116 OCIAD1Q9NX40 245 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 FRMD4BQ9Y2L6 1034 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 RPS6KL1Q9Y6S9 549 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 WASF2Q9Y6W5 498 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 ZGRF1Q86YA3 2104 aa10.37□□□□□ -0.75
CDHR3-209ENST00000472116 ANKHD1Q8IWZ3 2542 aaKnown RBP10.36□□□□□ -0.75
CDHR3-209ENST00000472116 KCNU1A8MYU2 1149 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 PRSS44E7EML9 344 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 SART1O43290 800 aaKnown RBP10.36□□□□□ -0.75
CDHR3-209ENST00000472116 B4GAT1O43505 415 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 DPM1O60762 260 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 CLDN11O75508 207 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 ENDOD1O94919 500 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 MT-CO1P00395 513 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 RHOCP08134 193 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 SLC2A3P11169 496 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 STAT5AP42229 794 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 RNASE9P60153 205 aaKnown RBP10.36□□□□□ -0.75
CDHR3-209ENST00000472116 PRR30Q53SZ7 412 aaPredicted RBP10.36□□□□□ -0.75
CDHR3-209ENST00000472116 SPECC1LQ69YQ0 1117 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 BRAPQ7Z569 592 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 TAC4Q86UU9 113 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 APLFQ8IW19 511 aaPredicted RBP10.36□□□□□ -0.75
CDHR3-209ENST00000472116 RYBPQ8N488 228 aaPredicted RBP10.36□□□□□ -0.75
CDHR3-209ENST00000472116 PDILTQ8N807 584 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 TAS1R2Q8TE23 839 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 WDR92Q96MX6 357 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 TWSG1Q9GZX9 223 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 MIS12Q9H081 205 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 ZDHHC6Q9H6R6 413 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 FAM13BQ9NYF5 915 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 KCND3Q9UK17 655 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 MRPS18BQ9Y676 258 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms