RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 RPLP0P05388 317 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 ALPIP09923 528 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 TRIM49P0CI25 452 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 TRIM49CP0CI26 452 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 SLC2A3P11169 496 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 HGFP14210 728 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 PRCPP42785 496 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 RGS7P49802 495 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 NEK3P51956 506 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 MAPK10P53779 464 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 CCL7P80098 99 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 UBXN1Q04323 297 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 STK4Q13043 487 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 MTA1Q13330 715 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 C1orf61Q13536 156 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 FGL2Q14314 439 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 STILQ15468 1287 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 TERF2Q15554 542 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 TSR1Q2NL82 804 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 TCP11X2Q5H9J9 407 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 SEL1L3Q68CR1 1132 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 LCLAT1Q6UWP7 414 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 BEND5Q7L4P6 421 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 B3GNT8Q7Z7M8 397 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 ZFAND4Q86XD8 727 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 DTX1Q86Y01 620 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 FSTL5Q8N475 847 aaPredicted RBP9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 ARL10Q8N8L6 244 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 GPBAR1Q8TDU6 330 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 DQX1Q8TE96 717 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 SLC35F5Q8WV83 523 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 USP7Q93009 1102 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 FAM149B1Q96BN6 582 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 NAPGQ99747 312 aaPredicted RBP9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 CPEB1Q9BZB8 566 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 FOXP3Q9BZS1 431 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 LRRN3Q9H3W5 708 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 THAP9Q9H5L6 903 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 IL36AQ9UHA7 158 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 KLF15Q9UIH9 416 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 CDC23Q9UJX2 597 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 TRAF3IP3Q9Y228 551 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 FHOD1Q9Y613 1164 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 NBASA2RRP1 2371 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 SPTBN1Q01082 2364 aaKnown RBP9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 C2orf72A6NCS6 295 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 LGALS16A8MUM7 142 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 O00370 1275 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 PIK3R2O00459 728 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 PES1O00541 588 aaKnown RBP9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 PSMA7O14818 248 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 CAPN5O15484 640 aaPredicted RBP9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 AP1G1O43747 822 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 GCATO75600 419 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 MYL1P05976 194 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 CTSLP07711 333 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 CTSEP14091 401 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 NR2F2P24468 414 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 EEF1GP26641 437 aaKnown RBP9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 KRT9P35527 623 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 NUMBP49757 651 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 MXI1P50539 228 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 YPEL5P62699 121 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 PPARDQ03181 441 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 EIF2B5Q13144 721 aaKnown RBP9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 ADAM9Q13443 819 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 BRD3Q15059 726 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 CNGA2Q16280 664 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 NFIL3Q16649 462 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 ZC3H12AQ5D1E8 599 aaKnown RBP9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 ARSIQ5FYB1 569 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 FHL5Q5TD97 284 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 PMF1Q6P1K2 205 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 GKN2Q86XP6 184 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 PHACTR4Q8IZ21 702 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 DENND6BQ8NEG7 585 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 C9orf43Q8TAL5 461 aaPredicted RBP9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 HTR3CQ8WXA8 447 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 ASB12Q8WXK4 309 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 CCDC74AQ96AQ1 378 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 EPAS1Q99814 870 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 C2orf49Q9BVC5 232 aaPredicted RBP9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 SLC12A9Q9BXP2 914 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 PARD6BQ9BYG5 372 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 MIS12Q9H081 205 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 MUC3BQ9H195 1237 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 CAAP1Q9H8G2 361 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 ABHD10Q9NUJ1 306 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 NAALADL1Q9UQQ1 740 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 HS3ST2Q9Y278 367 aa9.06□□□□□ -0.96
SYNGAP1-205ENST00000470232 A0A0U1RQJ8 604 aa9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 BICDL2A1A5D9 508 aa9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 TRIM49BA6NDI0 452 aa9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 LRRC10BA6NIK2 292 aa9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 ZNF891A8MT65 544 aaPredicted RBP9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 NEMP1O14524 444 aa9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 ZW10O43264 779 aa9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 TSPAN6O43657 245 aa9.05□□□□□ -0.96
SYNGAP1-205ENST00000470232 KLRC4O43908 158 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms