RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ARID3BQ8IVW6 561 aaPredicted RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 ATP2A3Q93084 1043 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 CHMP6Q96FZ7 201 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 ATXN7L3BQ96GX2 97 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 NUDCD1Q96RS6 583 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 RANBP9Q96S59 729 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 CCT8L2Q96SF2 557 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 C12orf65Q9H3J6 166 aaKnown RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 TREX1Q9NSU2 369 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 LHX3Q9UBR4 397 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 NUP210Q8TEM1 1887 aaPredicted RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 ASMTLO95671 621 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 MT-CO1P00395 513 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 EPOP01588 193 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 PRKCGP05129 697 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 IL9RQ01113 521 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 USP4Q13107 963 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 SLC14A2Q15849 920 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 GRTP1Q5TC63 336 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 LVRNQ6Q4G3 990 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 CKAP2Q8WWK9 683 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 RBBP8Q99708 897 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 SLC28A3Q9HAS3 691 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 PCMTD2Q9NV79 361 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 SLC17A7Q9P2U7 560 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 CHKBQ9Y259 395 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 MYO9BQ13459 2157 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 NEDD8-MDP1E9PL57 170 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 K7ERQ8 282 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 COPEO14579 308 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 TM9SF1O15321 606 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 NDST3O95803 873 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 FAM107AO95990 144 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 ARNTP27540 789 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 RAB30Q15771 203 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 PLEKHG6Q3KR16 790 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 TSTD2Q5T7W7 516 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 RNF43Q68DV7 783 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 RETSATQ6NUM9 610 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 VN1R2Q8NFZ6 395 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 BLOC1S5Q8TDH9 187 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 ACDQ96AP0 544 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 ZNF317Q96PQ6 595 aaPredicted RBP18.3■□□□□ 0.52
SMC4-211ENST00000469858 TRIB3Q96RU7 358 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 BBS2Q9BXC9 721 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 LMAN2LQ9H0V9 348 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 LINC00597Q9H2U6 94 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 ABCB8Q9NUT2 735 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 ZMYM5Q9UJ78 669 aa18.3■□□□□ 0.52
SMC4-211ENST00000469858 TRANK1O15050 2925 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 VIMP08670 466 aaKnown RBP18.29■□□□□ 0.52
SMC4-211ENST00000469858 PIRTP0C851 137 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 CES1P23141 567 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 CCNFP41002 786 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 ABCG1P45844 678 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 ARCN1P48444 511 aaKnown RBP18.29■□□□□ 0.52
SMC4-211ENST00000469858 PDE1BQ01064 536 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 HHATQ5VTY9 493 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 KIAA0930Q6ICG6 404 aaPredicted RBP18.29■□□□□ 0.52
SMC4-211ENST00000469858 ZNF473Q8WTR7 871 aaKnown RBP18.29■□□□□ 0.52
SMC4-211ENST00000469858 TDRD1Q9BXT4 1180 aaKnown RBP18.29■□□□□ 0.52
SMC4-211ENST00000469858 SLC13A1Q9BZW2 595 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 TBC1D14Q9P2M4 693 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 INTS6Q9UL03 887 aaKnown RBP18.29■□□□□ 0.52
SMC4-211ENST00000469858 PCDHGC4Q9Y5F7 938 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 WNT6Q9Y6F9 365 aa18.29■□□□□ 0.52
SMC4-211ENST00000469858 TPP1O14773 563 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 ALDOAP04075 364 aaKnown RBP18.28■□□□□ 0.52
SMC4-211ENST00000469858 HLA-FP30511 346 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 SPRP35270 261 aaPredicted RBP18.28■□□□□ 0.52
SMC4-211ENST00000469858 NEK3P51956 506 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 LIMK2P53671 638 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 ZSCAN26Q16670 478 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 ATXN7L2Q5T6C5 722 aaPredicted RBP18.28■□□□□ 0.52
SMC4-211ENST00000469858 ARMC3Q5W041 872 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 TIFABQ6ZNK6 161 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 MICALCLQ6ZW33 695 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 IRF7Q92985 503 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 RMDN1Q96DB5 314 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 SRPK1Q96SB4 655 aaKnown RBP18.28■□□□□ 0.52
SMC4-211ENST00000469858 TM6SF2Q9BZW4 377 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 IQCGQ9H095 443 aaKnown RBP18.28■□□□□ 0.52
SMC4-211ENST00000469858 SFXN1Q9H9B4 322 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 GRID1Q9ULK0 1009 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 RAI2Q9Y5P3 530 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 TCP11X1B4DZS4 312 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 RFXAPO00287 272 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 SMAD6O43541 496 aaKnown RBP18.28■□□□□ 0.52
SMC4-211ENST00000469858 DMTNQ08495 405 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 DNAJC3Q13217 504 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 THOC5Q13769 683 aaKnown RBP18.28■□□□□ 0.52
SMC4-211ENST00000469858 CPLX4Q7Z7G2 160 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 LRRC34Q8IZ02 419 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 NDUFAF2Q8N183 169 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 MAGEB18Q96M61 343 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 GDF15Q99988 308 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 IGFLR1Q9H665 355 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 SPHK2Q9NRA0 654 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 NSMCE4AQ9NXX6 385 aa18.28■□□□□ 0.52
SMC4-211ENST00000469858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms