RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 DNAJC21Q5F1R6 531 aaKnown RBP12.97□□□□□ -0.33
RUNX1-213ENST00000469087 RALGPS1Q5JS13 557 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 CAPN12Q6ZSI9 719 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 PALM2Q8IXS6 379 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 EBNA1BP2Q99848 306 aaKnown RBP12.97□□□□□ -0.33
RUNX1-213ENST00000469087 CEP44Q9C0F1 390 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 MTG2Q9H4K7 406 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 PLAC1Q9HBJ0 212 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 TRPV5Q9NQA5 729 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 SYBUQ9NX95 663 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 BFARQ9NZS9 450 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 HCN2Q9UL51 889 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 PLAAQ9Y263 795 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 NFS1Q9Y697 457 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 MAD1L1Q9Y6D9 718 aa12.97□□□□□ -0.33
RUNX1-213ENST00000469087 COL6A3P12111 3177 aa12.96□□□□□ -0.33
RUNX1-213ENST00000469087 AP3B1O00203 1094 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 ATP8B1O43520 1251 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 SHBGP04278 402 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 ATXN1LP0C7T5 689 aaKnown RBP12.96□□□□□ -0.34
RUNX1-213ENST00000469087 GRIA2P42262 883 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 SNRPD1P62314 119 aaKnown RBP12.96□□□□□ -0.34
RUNX1-213ENST00000469087 TRAF2Q12933 501 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 MYLK3Q32MK0 819 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 CARD16Q5EG05 197 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 SIRPB2Q5JXA9 342 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 CFAP58Q5T655 872 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 IER5LQ5T953 404 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 EMC10Q5UCC4 262 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 DPY19L3Q6ZPD9 716 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 C3orf62Q6ZUJ4 267 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 Q6ZVU0 165 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 CAMK1DQ8IU85 385 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 PCDH20Q8N6Y1 951 aaKnown RBP12.96□□□□□ -0.34
RUNX1-213ENST00000469087 OR2A12Q8NGT7 310 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 OR2W6PQ8NHA6 318 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 IFT43Q96FT9 208 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 FEM1CQ96JP0 617 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 ZIM3Q96PE6 472 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 TDRD1Q9BXT4 1180 aaKnown RBP12.96□□□□□ -0.34
RUNX1-213ENST00000469087 VIPAS39Q9H9C1 493 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 HECAQ9UBI9 543 aaPredicted RBP12.96□□□□□ -0.34
RUNX1-213ENST00000469087 ZC3H7BQ9UGR2 993 aaKnown RBP12.96□□□□□ -0.34
RUNX1-213ENST00000469087 RAI2Q9Y5P3 530 aa12.96□□□□□ -0.34
RUNX1-213ENST00000469087 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.95□□□□□ -0.34
RUNX1-213ENST00000469087 AGPSO00116 658 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
RUNX1-213ENST00000469087 FZD6O60353 706 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 IGSF6O95976 241 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 GSRP00390 522 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 BMP1P13497 986 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 CCNHP51946 323 aaPredicted RBP12.95□□□□□ -0.34
RUNX1-213ENST00000469087 AP1S1P61966 158 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 EIF4HQ15056 248 aaKnown RBP12.95□□□□□ -0.34
RUNX1-213ENST00000469087 ALS2CLQ60I27 953 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 CASC4Q6P4E1 433 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 RYBPQ8N488 228 aaPredicted RBP12.95□□□□□ -0.34
RUNX1-213ENST00000469087 ZNF366Q8N895 744 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 CHST14Q8NCH0 376 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 PTPRN2Q92932 1015 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 STAMBPL1Q96FJ0 436 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 TTC25Q96NG3 672 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 CHRAC1Q9NRG0 131 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 HEBP1Q9NRV9 189 aa12.95□□□□□ -0.34
RUNX1-213ENST00000469087 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
RUNX1-213ENST00000469087 WASH3PC4AMC7 463 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 SPECC1L-ADORA2AF8WAN1 911 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 NARSO43776 548 aaKnown RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 PIGNO95427 931 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 POP4O95707 220 aaKnown RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 NDST3O95803 873 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 CPP00450 1065 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 NUDT17P0C025 328 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 CTHP32929 405 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 ST8SIA6P61647 398 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 GALNT3Q14435 633 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 ZNF234Q14588 700 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 POU6F1Q14863 301 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 PDCD6IPQ8WUM4 868 aaKnown RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 ZNF778Q96MU6 729 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 P2RY13Q9BPV8 354 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 IL22Q9GZX6 179 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 VPS37BQ9H9H4 285 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 ZDHHC4Q9NPG8 344 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 BPTFQ12830 3046 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 LOC730098B7Z3J9 87 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 K7EQS6 105 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 HTRA2O43464 458 aaPredicted RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 APODP05090 189 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 HLA-DPA1P20036 260 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 SLC8A1P32418 973 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 BCL2L1Q07817 233 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 PTPRRQ15256 657 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 PUS10Q3MIT2 529 aaKnown RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 PREPLQ4J6C6 727 aaPredicted RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms