RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TXNDC8Q6A555 127 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 C16orf54Q6UWD8 224 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 ZNF793Q6ZN11 406 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 DEF8Q6ZN54 512 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 CADM3Q8N126 398 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 SLC25A41Q8N5S1 370 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 USP6NLQ92738 828 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 ATOH1Q92858 354 aaPredicted RBP5.36□□□□□ -1.55
LSM5-209ENST00000468872 VCPIP1Q96JH7 1222 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 SCPEP1Q9HB40 452 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 WDR6Q9NNW5 1121 aaKnown RBP5.36□□□□□ -1.55
LSM5-209ENST00000468872 PNRC2Q9NPJ4 139 aaKnown RBP5.36□□□□□ -1.55
LSM5-209ENST00000468872 EIF2B3Q9NR50 452 aaKnown RBP5.36□□□□□ -1.55
LSM5-209ENST00000468872 SEPT11Q9NVA2 429 aaKnown RBP5.36□□□□□ -1.55
LSM5-209ENST00000468872 LIMA1Q9UHB6 759 aaKnown RBP5.36□□□□□ -1.55
LSM5-209ENST00000468872 INTS6Q9UL03 887 aaKnown RBP5.36□□□□□ -1.55
LSM5-209ENST00000468872 KCNE2Q9Y6J6 123 aa5.36□□□□□ -1.55
LSM5-209ENST00000468872 RUSC2Q8N2Y8 1516 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 ZMYM2Q9UBW7 1377 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 A0A0G2JK05 382 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 SNAP23O00161 211 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 PRPF4O43172 522 aaKnown RBP eCLIP5.35□□□□□ -1.55
LSM5-209ENST00000468872 LIASO43766 372 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 CYP19A1P11511 503 aaPredicted RBP5.35□□□□□ -1.55
LSM5-209ENST00000468872 SLC2A4P14672 509 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 TM4SF1P30408 202 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 HOXD13P35453 343 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 CENPAP49450 140 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 CLNS1AP54105 237 aaKnown RBP5.35□□□□□ -1.55
LSM5-209ENST00000468872 CLDN2P57739 230 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 LINC00205P59089 165 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 OLR1P78380 273 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 ID2Q02363 134 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 RNPS1Q15287 305 aaKnown RBP5.35□□□□□ -1.55
LSM5-209ENST00000468872 TOMM20Q15388 145 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 MED22Q15528 200 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 TWIST1Q15672 202 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 SMTNL2Q2TAL5 461 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 PIP4P1Q86T03 277 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 SERPINA11Q86U17 422 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 DPP10Q8N608 796 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 LRRC57Q8N9N7 239 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 INTS12Q96CB8 462 aaKnown RBP5.35□□□□□ -1.55
LSM5-209ENST00000468872 RSRC1Q96IZ7 334 aaKnown RBP5.35□□□□□ -1.55
LSM5-209ENST00000468872 TIGD1Q96MW7 591 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 NEUROD6Q96NK8 337 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 TUBB6Q9BUF5 446 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 THSD1Q9NS62 852 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 RNF146Q9NTX7 359 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 NCKIPSDQ9NZQ3 722 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 TBC1D29Q9UFV1 150 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 SLCO3A1Q9UIG8 710 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 A4GNTQ9UNA3 340 aa5.35□□□□□ -1.55
LSM5-209ENST00000468872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
LSM5-209ENST00000468872 TAF4O00268 1085 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 EBAG9O00559 213 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 TLR2O60603 784 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 CENPBP07199 599 aaPredicted RBP5.34□□□□□ -1.55
LSM5-209ENST00000468872 SNHG28P0DPA3 235 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 ZNF8P17098 575 aaPredicted RBP5.34□□□□□ -1.55
LSM5-209ENST00000468872 HOXB6P17509 224 aaKnown RBP5.34□□□□□ -1.55
LSM5-209ENST00000468872 CTPS1P17812 591 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 NFKBIAP25963 317 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 TTKP33981 857 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 RYKP34925 604 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 SRSF1Q07955 248 aaKnown RBP eCLIP5.34□□□□□ -1.55
LSM5-209ENST00000468872 CCNG2Q16589 344 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 GSTA3Q16772 222 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 PIK3CD-AS1Q5SR53 167 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 HMBOX1Q6NT76 420 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 KLHL24Q6TFL4 600 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 CYP20A1Q6UW02 462 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 CCDC129Q6ZRS4 1044 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 IKBIPQ70UQ0 350 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 BRINP3Q76B58 766 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 SAMD14Q8IZD0 417 aaPredicted RBP5.34□□□□□ -1.55
LSM5-209ENST00000468872 TMEM116Q8NCL8 245 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 RASSF8Q8NHQ8 419 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 MSI2Q96DH6 328 aaKnown RBP5.34□□□□□ -1.55
LSM5-209ENST00000468872 WDR83Q9BRX9 315 aaKnown RBP5.34□□□□□ -1.55
LSM5-209ENST00000468872 NUF2Q9BZD4 464 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 FOXP1Q9H334 677 aaPredicted RBP5.34□□□□□ -1.55
LSM5-209ENST00000468872 EBF3Q9H4W6 596 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 HAUS2Q9NVX0 235 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 CORO1CQ9ULV4 474 aaPredicted RBP5.34□□□□□ -1.55
LSM5-209ENST00000468872 RAP2CQ9Y3L5 183 aa5.34□□□□□ -1.55
LSM5-209ENST00000468872 UNC13AQ9UPW8 1703 aa5.34□□□□□ -1.56
LSM5-209ENST00000468872 TTBK1Q5TCY1 1321 aaPredicted RBP5.33□□□□□ -1.56
LSM5-209ENST00000468872 A0A1W2PPC1 479 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 A0A1W2PQF6 199 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 C17orf102A2RUQ5 167 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 LIPT2A6NK58 231 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 A6NNC1 897 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 NPIPB11E5RHQ5 1161 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 GTPBP1O00178 669 aaKnown RBP5.33□□□□□ -1.56
LSM5-209ENST00000468872 AP3D1O14617 1153 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 TLX3O43711 291 aaPredicted RBP5.33□□□□□ -1.56
LSM5-209ENST00000468872 CNOT3O75175 753 aaKnown RBP5.33□□□□□ -1.56
LSM5-209ENST00000468872 PTPN2P17706 415 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 TNFSF8P32971 234 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms