RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 FNIP2Q9P278 1114 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 WDR35Q9P2L0 1181 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 UVRAGQ9P2Y5 699 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 STK39Q9UEW8 545 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 PCSK1NQ9UHG2 260 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 ANAPC7Q9UJX3 599 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 AMFRQ9UKV5 643 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 PACSIN2Q9UNF0 486 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 NAALADL1Q9UQQ1 740 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 LZTS1Q9Y250 596 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 ALG6Q9Y672 507 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 SCINQ9Y6U3 715 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 PTPRSQ13332 1948 aa4.24□□□□□ -1.73
TMEM39A-204ENST00000468545 NCANO14594 1321 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 COL4A6Q14031 1691 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 A0A0A6YYK5 440 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 GRID2IPA4D2P6 1211 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 TMEM191CA6NGB0 347 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 YJEFN3A6XGL0 299 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 BTNL10A8MVZ5 291 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ALG1L2C9J202 215 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 E7ENQ6 273 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 C5orf67F2Z3F1 127 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 MDM4O15151 490 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 CCL16O15467 120 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF500O60304 480 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 KDM1AO60341 852 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 SRGAP2O75044 1071 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RFPL2O75678 378 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RNF8O76064 485 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 URI1O94763 535 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RTN3O95197 1032 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 TBX18O95935 607 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ATP1A1P05023 1023 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 HMBSP08397 361 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 MYL4P12829 197 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RARGP13631 454 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 EPCAMP16422 314 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ATF6P18850 670 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 COMTP21964 271 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 CFPP27918 469 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 SDC4P31431 198 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 MAGEA11P43364 429 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 PGFP49763 221 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 SULT1E1P49888 294 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ATXN1P54253 815 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 DAOAP59103 153 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 YWHAGP61981 247 aaKnown RBP eCLIP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 YWHAZP63104 245 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 OGDHQ02218 1023 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 TAF10Q12962 218 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 NME3Q13232 169 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 CAMK1Q14012 370 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 MYBPC3Q14896 1274 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 VEPH1Q14D04 833 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 LLGL1Q15334 1064 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RPS6KA1Q15418 735 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 C15orf59Q2T9L4 293 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 CFAP221Q4G0U5 840 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RAB6CQ53S08 254 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 DCAF6Q58WW2 860 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ODF2Q5BJF6 829 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 PRAMEF9Q5VWM5 478 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 SYPL2Q5VXT5 272 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 BSPRYQ5W0U4 402 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 LILRA6Q6PI73 481 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 CCDC149Q6ZUS6 474 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 FRMD7Q6ZUT3 714 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 DENND5BQ6ZUT9 1274 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RSRC2Q7L4I2 434 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 PEX26Q7Z412 305 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 DNAJB7Q7Z6W7 309 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ADGRD2Q7Z7M1 963 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 C1QL4Q86Z23 238 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ZDHHC17Q8IUH5 632 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ADGRG2Q8IZP9 1017 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 SYCE1Q8N0S2 351 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ELMOD1Q8N336 334 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 TP53I13Q8NBR0 393 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 C3orf20Q8ND61 904 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RNF139Q8WU17 664 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 MCRS1Q96EZ8 462 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 FUBP3Q96I24 572 aaKnown RBP eCLIP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF512Q96ME7 567 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 CFAP57Q96MR6 1250 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 WDR24Q96S15 920 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 NAPGQ99747 312 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ZDHHC5Q9C0B5 715 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RAB6CQ9H0N0 254 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 POFUT1Q9H488 388 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 FBXO44Q9H4M3 255 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 PRDM12Q9H4Q4 367 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 ZWILCHQ9H900 591 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 NMUR1Q9HB89 426 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 CSNK1G1Q9HCP0 422 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 TRPC7Q9HCX4 862 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RRAGDQ9NQL2 400 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 MAN1C1Q9NR34 630 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms