RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.2
RPP40-204ENST00000468105 SLC25A13Q9UJS0 675 aa13.81□□□□□ -0.2
RPP40-204ENST00000468105 NOCTQ9UK39 431 aaKnown RBP13.81□□□□□ -0.2
RPP40-204ENST00000468105 ATXN7L1Q9ULK2 861 aaPredicted RBP13.81□□□□□ -0.2
RPP40-204ENST00000468105 FADS3Q9Y5Q0 445 aa13.81□□□□□ -0.2
RPP40-204ENST00000468105 USP9YO00507 2555 aaPredicted RBP13.81□□□□□ -0.2
RPP40-204ENST00000468105 A0A1W2PQM1 296 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 NEMP2A6NFY4 417 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 MED7O43513 233 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 PAGE1O75459 146 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 SKILP12757 684 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 JUNDP17535 347 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 CYLC1P35663 651 aaPredicted RBP13.8□□□□□ -0.2
RPP40-204ENST00000468105 ABL2P42684 1182 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 DUSP3P51452 185 aaPredicted RBP13.8□□□□□ -0.2
RPP40-204ENST00000468105 PFN3P60673 137 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 CDR2Q01850 454 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 CLCA4Q14CN2 919 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 ASTE1Q2TB18 679 aaPredicted RBP13.8□□□□□ -0.2
RPP40-204ENST00000468105 PARS2Q7L3T8 475 aaKnown RBP13.8□□□□□ -0.2
RPP40-204ENST00000468105 ZNF571Q7Z3V5 609 aaPredicted RBP13.8□□□□□ -0.2
RPP40-204ENST00000468105 NOP9Q86U38 636 aaKnown RBP13.8□□□□□ -0.2
RPP40-204ENST00000468105 VASH2Q86V25 355 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 VPS36Q86VN1 386 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 PARGQ86W56 976 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 ATP6V0D2Q8N8Y2 350 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 ATP11CQ8NB49 1132 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 WDR36Q8NI36 951 aaKnown RBP13.8□□□□□ -0.2
RPP40-204ENST00000468105 AGPAT1Q99943 283 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 CCDC3Q9BQI4 270 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 LRRC61Q9BV99 259 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 DUSP23Q9BVJ7 150 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 FOXP3Q9BZS1 431 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 KCNF1Q9H3M0 494 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 NHEJ1Q9H9Q4 299 aaPredicted RBP13.8□□□□□ -0.2
RPP40-204ENST00000468105 DDIT4Q9NX09 232 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 ZNF212Q9UDV6 495 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 PCDHGC3Q9UN70 934 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 CSNK1G3Q9Y6M4 447 aa13.8□□□□□ -0.2
RPP40-204ENST00000468105 USP9XQ93008 2570 aaPredicted RBP13.79□□□□□ -0.2
RPP40-204ENST00000468105 IGLON5A6NGN9 336 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 YY2O15391 372 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 ZMPSTE24O75844 475 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 ITGA2BP08514 1039 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 ADRB3P13945 408 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 ITIH2P19823 946 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 UGT1A5P35504 534 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 EIF4A3P38919 411 aaKnown RBP13.79□□□□□ -0.2
RPP40-204ENST00000468105 ETV5P41161 510 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 NR0B2Q15466 257 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 TCEA2Q15560 299 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 RABGAP1LQ5R372 815 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 C22orf39Q6P5X5 142 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 TRIM72Q6ZMU5 477 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 TMPRSS9Q7Z410 1059 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 OR7D4Q8NG98 312 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 ZNF606Q8WXB4 792 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 TRIM44Q96DX7 344 aaPredicted RBP13.79□□□□□ -0.2
RPP40-204ENST00000468105 CCDC42Q96M95 316 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 CPXM1Q96SM3 734 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 C1QTNF2Q9BXJ5 285 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 FAM117AQ9C073 453 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 FAM204AQ9H8W3 233 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 IL36AQ9UHA7 158 aa13.79□□□□□ -0.2
RPP40-204ENST00000468105 ZFC3H1O60293 1989 aaKnown RBP13.79□□□□□ -0.2
RPP40-204ENST00000468105 CCDC187A0A096LP49 1063 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 SOWAHDA6NJG2 315 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 EIF3CLB5ME19 914 aaKnown RBP13.78□□□□□ -0.2
RPP40-204ENST00000468105 THAP12O43422 761 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 TCEA3O75764 348 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 LCA5LO95447 670 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
RPP40-204ENST00000468105 CHRNB2P17787 502 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 ITIH1P19827 911 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 TNFAIP3P21580 790 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 CCL7P80098 99 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 FMO1Q01740 532 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 PDCLQ13371 301 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 SLC18A3Q16572 532 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 TBR1Q16650 682 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
RPP40-204ENST00000468105 PPP1R2P3Q6NXS1 205 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 ARL14Q8N4G2 192 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 SLC30A5Q8TAD4 765 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 STK32AQ8WU08 396 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 EIF3CQ99613 913 aaKnown RBP13.78□□□□□ -0.2
RPP40-204ENST00000468105 SIK2Q9H0K1 926 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 MUC3BQ9H195 1237 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 DEF6Q9H4E7 631 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 MBNL1Q9NR56 388 aaKnown RBP13.78□□□□□ -0.2
RPP40-204ENST00000468105 PIGVQ9NUD9 493 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 WDR70Q9NW82 654 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 MPP6Q9NZW5 540 aa13.78□□□□□ -0.2
RPP40-204ENST00000468105 EPN1Q9Y6I3 576 aaPredicted RBP13.78□□□□□ -0.2
RPP40-204ENST00000468105 FAM170AA1A519 330 aa13.77□□□□□ -0.21
RPP40-204ENST00000468105 DDX3XO00571 662 aaKnown RBP eCLIP13.77□□□□□ -0.21
RPP40-204ENST00000468105 TPP1O14773 563 aa13.77□□□□□ -0.21
RPP40-204ENST00000468105 AKR1B10O60218 316 aa13.77□□□□□ -0.21
RPP40-204ENST00000468105 NDUFA10O95299 355 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms