RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 LMX1AQ8TE12 382 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 CENPTQ96BT3 561 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 GBP4Q96PP9 640 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 DEPDC7Q96QD5 511 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 CNPY3Q9BT09 278 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 ABCG4Q9H172 646 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 KIF26BQ2KJY2 2108 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 LRRC10BA6NIK2 292 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 WASH4PA8MWX3 477 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 TM7SF2O76062 418 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 FERP16591 822 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 DESP17661 470 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 ITIH2P19823 946 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 IGFALSP35858 605 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 SERINC3Q13530 473 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 PTK2BQ14289 1009 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 CDKN3Q16667 212 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 DEFB133Q30KQ1 61 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 TBC1D25Q3MII6 688 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 PARP15Q460N3 678 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 PPP1R15BQ5SWA1 713 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 MAPK15Q8TD08 544 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 CXorf40AQ8TE69 158 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 BTN2A2Q8WVV5 523 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 EXOC2Q96KP1 924 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 WRAP53Q9BUR4 548 aaKnown RBP19.39■□□□□ 0.69
COL9A3-206ENST00000466532 C1QTNF7Q9BXJ2 289 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 DKK3Q9UBP4 350 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 MFHAS1Q9Y4C4 1052 aa19.39■□□□□ 0.69
COL9A3-206ENST00000466532 BPTFQ12830 3046 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 FGF10O15520 208 aaPredicted RBP19.38■□□□□ 0.69
COL9A3-206ENST00000466532 CSO75390 466 aaKnown RBP19.38■□□□□ 0.69
COL9A3-206ENST00000466532 CCDC172P0C7W6 258 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 TIMP2P16035 220 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 FASNP49327 2511 aaKnown RBP19.38■□□□□ 0.69
COL9A3-206ENST00000466532 YPEL5P62699 121 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 NCAPHQ15003 741 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 ACAD10Q6JQN1 1059 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 APTXQ7Z2E3 356 aaKnown RBP19.38■□□□□ 0.69
COL9A3-206ENST00000466532 MCOLN2Q8IZK6 566 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 RBFAQ8N0V3 343 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 UMODL1-AS1Q8N2C9 162 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 IL12RB2Q99665 862 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 NCAPGQ9BPX3 1015 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 HSD3B7Q9H2F3 369 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 NCKIPSDQ9NZQ3 722 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 SPASTQ9UBP0 616 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 LHX3Q9UBR4 397 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 APOBEC3BQ9UH17 382 aaKnown RBP19.38■□□□□ 0.69
COL9A3-206ENST00000466532 SALL4Q9UJQ4 1053 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 PTPRQQ9UMZ3 2332 aa19.38■□□□□ 0.69
COL9A3-206ENST00000466532 CPED1A4D0V7 1026 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 EIF4E1BA6NMX2 242 aaKnown RBP19.37■□□□□ 0.69
COL9A3-206ENST00000466532 INSIG1O15503 277 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 USP12O75317 370 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 XPAP23025 273 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-206ENST00000466532 TPI1P60174 286 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 OGDHQ02218 1023 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 CCDC173Q0VFZ6 552 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 CYTH1Q15438 398 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 KLHL40Q2TBA0 621 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 GUSBP11Q6P575 273 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 PHACTR4Q8IZ21 702 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 TP53I13Q8NBR0 393 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-206ENST00000466532 CPEB1Q9BZB8 566 aaKnown RBP19.37■□□□□ 0.69
COL9A3-206ENST00000466532 TCEAL2Q9H3H9 227 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-206ENST00000466532 PRORYQ9H606 182 aa19.37■□□□□ 0.69
COL9A3-206ENST00000466532 MBNL1Q9NR56 388 aaKnown RBP19.37■□□□□ 0.69
COL9A3-206ENST00000466532 UBA2Q9UBT2 640 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-206ENST00000466532 SMG1Q96Q15 3661 aaKnown RBP19.37■□□□□ 0.69
COL9A3-206ENST00000466532 TPP1O14773 563 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 PIGNO95427 931 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 MPOP05164 745 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 TNFAIP3P21580 790 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 TGM2P21980 687 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 SUOXP51687 545 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 GABREP78334 506 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 ELP6Q0PNE2 266 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 C1orf61Q13536 156 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 PRRT3Q5FWE3 981 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 MACC1Q6ZN28 852 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 EFL1Q7Z2Z2 1120 aaKnown RBP19.36■□□□□ 0.69
COL9A3-206ENST00000466532 DNAAF5Q86Y56 855 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 AOPEPQ8N6M6 819 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 UBL7Q96S82 380 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-206ENST00000466532 SLC13A1Q9BZW2 595 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 PDFQ9HBH1 243 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 GPATCH2LQ9NWQ4 482 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 TAS2R14Q9NYV8 317 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 PNMA8BQ9ULN7 279 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-206ENST00000466532 AP4E1Q9UPM8 1137 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 RAI2Q9Y5P3 530 aa19.36■□□□□ 0.69
COL9A3-206ENST00000466532 EME2A4GXA9 379 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-206ENST00000466532 TMCO5BA8MYB1 307 aa19.35■□□□□ 0.69
COL9A3-206ENST00000466532 GOLGA6L22H0YM25 854 aa19.35■□□□□ 0.69
COL9A3-206ENST00000466532 TOR1BO14657 336 aa19.35■□□□□ 0.69
COL9A3-206ENST00000466532 RIOK3O14730 519 aaKnown RBP19.35■□□□□ 0.69
COL9A3-206ENST00000466532 GCATO75600 419 aa19.35■□□□□ 0.69
COL9A3-206ENST00000466532 ATP1A3P13637 1013 aa19.35■□□□□ 0.69
COL9A3-206ENST00000466532 HTR7P34969 479 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms