RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 K7ERQ8 282 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 TM9SF1O15321 606 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 ZMPSTE24O75844 475 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 LAMP2P13473 410 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 CCND1P24385 295 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 GPX6P59796 221 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 MGAT5Q09328 741 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 MESP2Q0VG99 397 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 LBRQ14739 615 aaKnown RBP18.85■□□□□ 0.61
CAPN3-209ENST00000466222 PDIK1LQ8N165 341 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 AGGF1Q8N302 714 aaeCLIP18.85■□□□□ 0.61
CAPN3-209ENST00000466222 FIBINQ8TAL6 211 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 LMLNQ96KR4 655 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 TRPV4Q9HBA0 871 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 ZFP14Q9HCL3 533 aa18.85■□□□□ 0.61
CAPN3-209ENST00000466222 GEMIN8Q9NWZ8 242 aaKnown RBP18.85■□□□□ 0.61
CAPN3-209ENST00000466222 CHADO15335 359 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 CYP17A1P05093 508 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 RENBPP51606 427 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 ITKQ08881 620 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 FAM47EQ6ZV65 393 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 ZNF534Q76KX8 674 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 KDELC2Q7Z4H8 507 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 CAND1Q86VP6 1230 aaKnown RBP18.84■□□□□ 0.61
CAPN3-209ENST00000466222 C12orf40Q86WS4 652 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 EXOC2Q96KP1 924 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 RIPOR3Q96MK2 946 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 VAT1Q99536 393 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 WDR83Q9BRX9 315 aaKnown RBP18.84■□□□□ 0.61
CAPN3-209ENST00000466222 EBF2Q9HAK2 575 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 GLOD4Q9HC38 313 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 VPS51Q9UID3 782 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 GGT7Q9UJ14 662 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 SPAG6O75602 509 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 KCNA5P22460 613 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 CTSOP43234 321 aaPredicted RBP18.84■□□□□ 0.61
CAPN3-209ENST00000466222 DSC2Q02487 901 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 NIPAL4Q0D2K0 466 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 DNAJC3Q13217 504 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 NAIF1Q69YI7 327 aaPredicted RBP18.84■□□□□ 0.61
CAPN3-209ENST00000466222 TEX26Q8N6G2 289 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 INPP5DQ92835 1189 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 CDX2Q99626 313 aaPredicted RBP18.84■□□□□ 0.61
CAPN3-209ENST00000466222 APOL2Q9BQE5 337 aa18.84■□□□□ 0.61
CAPN3-209ENST00000466222 FRMD8Q9BZ67 464 aaPredicted RBP18.84■□□□□ 0.61
CAPN3-209ENST00000466222 VCANP13611 3396 aa18.83■□□□□ 0.61
CAPN3-209ENST00000466222 NEBLO76041 1014 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 RPA3P35244 121 aaPredicted RBP18.83■□□□□ 0.6
CAPN3-209ENST00000466222 FDFT1P37268 417 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 MSH2P43246 934 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 MAGEA6P43360 314 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 RGRP47804 291 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 ANKMY2Q8IV38 441 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 C4orf33Q8N1A6 199 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 RPL10LQ96L21 214 aaKnown RBP18.83■□□□□ 0.6
CAPN3-209ENST00000466222 NSMCE3Q96MG7 304 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 TMEM237Q96Q45 408 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 LRRC37BQ96QE4 947 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 FAM83CQ9BQN1 747 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 LRMDAQ9H2I8 198 aa18.83■□□□□ 0.6
CAPN3-209ENST00000466222 GRXCR2A6NFK2 248 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 CACNG3O60359 315 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 HNRNPCL1O60812 293 aaKnown RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 CYTH1Q15438 398 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 SKIV2LQ15477 1246 aaKnown RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 PLEKHG6Q3KR16 790 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 FUT11Q495W5 492 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 TMCO4Q5TGY1 634 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 PRPF39Q86UA1 669 aaKnown RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 IGDCC3Q8IVU1 814 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 PALM2Q8IXS6 379 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 OTUB2Q96DC9 234 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 PAFAH2Q99487 392 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 TRIM56Q9BRZ2 755 aaKnown RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 HPS4Q9NQG7 708 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 KIAA1522Q9P206 1035 aaPredicted RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 UBA2Q9UBT2 640 aaPredicted RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 C2orf16Q68DN1 1984 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 SLC9A3R1O14745 358 aaPredicted RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 SMAD6O43541 496 aaKnown RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 KRT16P08779 473 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 RASSF2P50749 326 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 SLC1A5Q15758 541 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 SEPT7Q16181 437 aaKnown RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 BBS9Q3SYG4 887 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 PRPF38BQ5VTL8 546 aaKnown RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 TMEM215Q68D42 235 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 KCTD11Q693B1 232 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 ITPRIPL1Q6GPH6 555 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 LVRNQ6Q4G3 990 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 C4orf22Q6V702 233 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 ZNF783Q6ZMS7 281 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 C3orf62Q6ZUJ4 267 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 FBXO36Q8NEA4 188 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 NSMCE1Q8WV22 266 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 FATE1Q969F0 183 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 CYTH2Q99418 400 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 MYLK2Q9H1R3 596 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 GTSE1Q9NYZ3 720 aa18.82■□□□□ 0.6
CAPN3-209ENST00000466222 CD207Q9UJ71 328 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms